RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 IGHV3-43DP0DP04 118 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 MLNP12872 115 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 CXCR1P25024 350 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 DCKP27707 260 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 RRM2P31350 389 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 CSNK1A1P48729 337 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 RAB9AP51151 201 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 HADHBP55084 474 aaKnown RBP2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 ATP6V0D1P61421 351 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 ACTA2P62736 377 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 ACTG2P63267 376 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 ACTC1P68032 377 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 ACTA1P68133 377 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 UNC119Q13432 240 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 SGCAQ16586 387 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 C1orf140Q5VVS0 124 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 LINC00173Q6ZV60 143 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 SLC36A1Q7Z2H8 476 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 OR5AS1Q8N127 324 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 DEFB125Q8N687 156 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 BPIFCQ8NFQ6 507 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 OR8G5Q8NG78 346 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 OR10G9Q8NGN4 311 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 MFSD8Q8NHS3 518 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 C16orf78Q8WTQ4 265 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 ECSITQ9BQ95 431 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 EMC6Q9BV81 110 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 WFDC10AQ9H1F0 79 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 POPDC3Q9HBV1 291 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 VPS29Q9UBQ0 182 aa2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 F11RQ9Y624 299 aaKnown RBP2.89□□□□□ -1.95
ECHDC1-223ENST00000534442 TRBV9A0A0B4J1U6 114 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 KLLNB2CW77 178 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 SUPT3HB4E1H0 165 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 F6UB75 175 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 H0Y980 276 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 SIRPB1O00241 398 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 SUPT3HO75486 399 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 HMGN2P05204 90 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 DUX4L4P0CJ87 422 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 CRISP2P16562 243 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 RCC1P18754 421 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 RPS5P46782 204 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 PITPNAQ00169 270 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 RUNX1Q01196 453 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 C2orf80Q0P641 193 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 MPPED2Q15777 294 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 GUCA2BQ16661 112 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 TEX36Q5VZQ5 186 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 AP1ARQ63HQ0 302 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 ZNF621Q6ZSS3 439 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 MKXQ8IYA7 352 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 STPG2Q8N412 459 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 FAM216BQ8N7L0 139 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 OR5B3Q8NH48 314 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 STAG3L4Q8TBR4 150 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 ZNF502Q8TBZ5 544 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 CCL13Q99616 98 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 TMEM70Q9BUB7 260 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 CCNB1IP1Q9NPC3 277 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 SLC25A37Q9NYZ2 338 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 LINC00527Q9UJ94 153 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 TBC1D24Q9ULP9 559 aa2.88□□□□□ -1.95
ECHDC1-223ENST00000534442 A0A096LPI6 279 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 NBDYA0A0U1RRE5 68 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CLDN24A6NM45 220 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 TMEM114B3SHH9 223 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 FTCDNL1E5RQL4 147 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 FAAHO00519 579 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 PEX7O00628 323 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 NDUFAB1O14561 156 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 AHSA1O95433 338 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 C6orf47O95873 294 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 HLA-DPB1P04440 258 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 ARG1P05089 322 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 KRT16P08779 473 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 MUC1P15941 1255 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 ZNF32P17041 273 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 BRS3P32247 399 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 SERPINB5P36952 375 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CD200P41217 278 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CX3CR1P49238 355 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 ERFP50548 548 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 BNIP2Q12982 314 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 SPIN4Q56A73 249 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 C8orf74Q6P047 294 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CMTM1Q8IZ96 169 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 C10orf111Q8N326 155 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 LRRC18Q8N456 261 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CLDN22Q8N7P3 220 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 OR4M1Q8NGD0 313 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 OR9Q1Q8NGQ5 310 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 OR10R2Q8NGX6 335 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 OR5K1Q8NHB7 308 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CDC26Q8NHZ8 85 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 MARCH1Q8TCQ1 289 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 CIDECQ96AQ7 238 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms