RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CA2P00918 260 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 APOA2P02652 100 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
COPB1-211ENST00000534234 OR8U9P0C7N5 309 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 GSTT2P0CG29 244 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 GSTT2BP0CG30 244 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 HSPA13P48723 471 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 SLURP1P55000 103 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 TBCEQ15813 527 aaPredicted RBP6.89□□□□□ -1.31
COPB1-211ENST00000534234 SSX1Q16384 188 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 MOGAT2Q3SYC2 334 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 IGSF11Q5DX21 431 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 PYHIN1Q6K0P9 492 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 IZUMO2Q6UXV1 221 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 PDPNQ86YL7 162 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.89□□□□□ -1.31
COPB1-211ENST00000534234 OR10R2Q8NGX6 335 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 OR10J5Q8NHC4 309 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 BLOC1S6Q9UL45 172 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 U3KQK5 164 aa6.89□□□□□ -1.31
COPB1-211ENST00000534234 A0A075B6Q4 140 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 IGHV4OR15-8A0A075B7B6 117 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 A0A087WW49 117 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 TRBV6-7A0A0A0MS04 114 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 SHISA3A0PJX4 238 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 IFITM5A6NNB3 132 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 RAB27BO00194 218 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 SLC25A17O43808 307 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 SPDEFO95238 335 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 HSPB1P04792 205 aaKnown RBP6.88□□□□□ -1.31
COPB1-211ENST00000534234 GNB3P16520 340 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 GADD45AP24522 165 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 LGALS7P47929 136 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 OR10A3P58181 314 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 TPPP2P59282 170 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 FXYD3Q14802 87 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 ZNF367Q7RTV3 350 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 ARPC1AQ92747 370 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 RHOVQ96L33 236 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 ASCL2Q99929 193 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 SLA2Q9H6Q3 261 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 ZNF355PQ9NSJ1 428 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 SLC35D1Q9NTN3 355 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 SDHAF2Q9NX18 166 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 ZNF230Q9UIE0 474 aaPredicted RBP6.88□□□□□ -1.31
COPB1-211ENST00000534234 SMAD5-AS1Q9Y6J3 95 aa6.88□□□□□ -1.31
COPB1-211ENST00000534234 TRDV1A0A1B0GX56 115 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 METTL21EPA6NDL7 271 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 CNIH1O95406 144 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 TRGV3P03979 118 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 FCGR3AP08637 254 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 RAB3BP20337 219 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 MYL9P24844 172 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 PJVKQ0ZLH3 352 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 ARFRP1Q13795 201 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 ACSM6Q6P461 480 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 OR5T1Q8NG75 326 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 GRPEL2Q8TAA5 225 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 MAFIPQ8WZ33 124 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 OR2D2Q9H210 308 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 NDUFB11Q9NX14 153 aa6.87□□□□□ -1.31
COPB1-211ENST00000534234 RBM7Q9Y580 266 aaKnown RBP6.87□□□□□ -1.31
COPB1-211ENST00000534234 A0A0B4J203 849 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 MFNGO00587 321 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 ARPC1BO15143 372 aaKnown RBP6.86□□□□□ -1.31
COPB1-211ENST00000534234 DIRAS3O95661 229 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 IGLV2-23P01705 113 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 HIST1H1DP16402 221 aaKnown RBP6.86□□□□□ -1.31
COPB1-211ENST00000534234 RAB6AP20340 208 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 TALDO1P37837 337 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
COPB1-211ENST00000534234 C22orf42Q6IC83 251 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 POC5Q8NA72 575 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 BVESQ8NE79 360 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 OR4C12Q96R67 309 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 GINS4Q9BRT9 223 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 CABLES2Q9BTV7 478 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 CENPOQ9BU64 300 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 RAB26Q9ULW5 256 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 COL7A1Q02388 2944 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 SRRM4A7MD48 611 aaKnown RBP6.86□□□□□ -1.31
COPB1-211ENST00000534234 SHOXO15266 292 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 CRYGBP07316 175 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 SPNP16150 400 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 GALP22466 123 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 SSBP2P81877 361 aaPredicted RBP6.86□□□□□ -1.31
COPB1-211ENST00000534234 PITPNAQ00169 270 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 CBX3Q13185 183 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 SRSF7Q16629 238 aaKnown RBP eCLIP6.86□□□□□ -1.31
COPB1-211ENST00000534234 RTL8BQ17RB0 113 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 CDNFQ49AH0 187 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 TMEM177Q53S58 311 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 C5orf30Q96GV9 206 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 HARBI1Q96MB7 349 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 TMEM68Q96MH6 324 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 ATG5Q9H1Y0 275 aa6.86□□□□□ -1.31
COPB1-211ENST00000534234 RANGRFQ9HD47 186 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms