RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PYHIN1Q6K0P9 492 aa9.51□□□□□ -0.89
SSBP3-214ENST00000533209 FAM71E2Q8N5Q1 922 aa9.51□□□□□ -0.89
SSBP3-214ENST00000533209 FCAMRQ8WWV6 532 aa9.51□□□□□ -0.89
SSBP3-214ENST00000533209 WNT10AQ9GZT5 417 aa9.51□□□□□ -0.89
SSBP3-214ENST00000533209 RABL2AQ9UBK7 228 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-214ENST00000533209 RABL2BQ9UNT1 228 aa9.51□□□□□ -0.89
SSBP3-214ENST00000533209 RBMX2Q9Y388 322 aaKnown RBP9.51□□□□□ -0.89
SSBP3-214ENST00000533209 WASHC3Q9Y3C0 194 aa9.51□□□□□ -0.89
SSBP3-214ENST00000533209 LINC00473A8K010 186 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 GABARAPH6UMI1 98 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 H7C2Y5 167 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 CTDSPLO15194 276 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 RBBP9O75884 186 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 NDUFA3O95167 84 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 APOA2P02652 100 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 IGKV1-16P04430 117 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 VDAC2P45880 294 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-214ENST00000533209 MRPS10P82664 201 aaKnown RBP9.5□□□□□ -0.89
SSBP3-214ENST00000533209 EIF4EBP1Q13541 118 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-214ENST00000533209 IL18Q14116 193 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 ARSJQ5FYB0 599 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-214ENST00000533209 C9orf152Q5JTZ5 239 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 SHISA2Q6UWI4 295 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 KLHDC1Q8N7A1 406 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 NPBQ8NG41 125 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 WIPF2Q8TF74 440 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-214ENST00000533209 SMIM4Q8WVI0 70 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 SECTM1Q8WVN6 248 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 DDB2Q92466 427 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 CCL28Q9NRJ3 127 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 SLC35D1Q9NTN3 355 aa9.5□□□□□ -0.89
SSBP3-214ENST00000533209 LIN7CQ9NUP9 197 aaKnown RBP9.5□□□□□ -0.89
SSBP3-214ENST00000533209 FABP12A6NFH5 140 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 M0QYG6 137 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 NBR2O15453 112 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 IGHG2P01859 326 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 FXYD4P59646 89 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 RPL30P62888 115 aaKnown RBP9.49□□□□□ -0.89
SSBP3-214ENST00000533209 TAGLNQ01995 201 aaKnown RBP9.49□□□□□ -0.89
SSBP3-214ENST00000533209 MSMO1Q15800 293 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 VAX1Q5SQQ9 334 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 BVESQ8NE79 360 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 MOB3AQ96BX8 217 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 ADTRPQ96IZ2 230 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 RNF5Q99942 180 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 CITED1Q99966 193 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 RASL11BQ9BPW5 248 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 ZNF2Q9BSG1 426 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-214ENST00000533209 SLC5A7Q9GZV3 580 aa9.49□□□□□ -0.89
SSBP3-214ENST00000533209 LINC01548A6NM66 108 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 RRHO14718 337 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 GSTZ1O43708 216 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-214ENST00000533209 CD74P04233 296 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 CD3DP04234 171 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 VSIG10L2P0DP72 767 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 HERV-K104P61576 105 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 RPS16P62249 146 aaKnown RBP9.48□□□□□ -0.89
SSBP3-214ENST00000533209 SSBP1Q04837 148 aaKnown RBP9.48□□□□□ -0.89
SSBP3-214ENST00000533209 C5orf64Q2M2E5 130 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 TMEM177Q53S58 311 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 ACTBL2Q562R1 376 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 ZNF818PQ6ZRF7 136 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 CCDC190Q86UF4 302 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 TMEM17Q86X19 198 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 TMEM229BQ8NBD8 167 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 OR6F1Q8NGZ6 308 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 FLYWCH2Q96CP2 140 aaKnown RBP9.48□□□□□ -0.89
SSBP3-214ENST00000533209 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
SSBP3-214ENST00000533209 TINAGL1Q9GZM7 467 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-214ENST00000533209 FXYD6Q9H0Q3 95 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 FBXL15Q9H469 300 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 V9GYH0 126 aa9.48□□□□□ -0.89
SSBP3-214ENST00000533209 A6NHS1 94 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 PEX14O75381 377 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 IGLV2-23P01705 113 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 HLA-DRB1P01911 266 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 RRASP10301 218 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 TBPP20226 339 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 GNRHRP30968 328 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 S100A5P33763 92 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 BRWD1-AS2P59051 145 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 TSPAN5P62079 268 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 PSG5Q15238 335 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 RTL8BQ17RB0 113 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 RNASE10Q5GAN6 216 aaKnown RBP9.47□□□□□ -0.89
SSBP3-214ENST00000533209 ZNF66Q6ZN08 573 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 KCTD9Q7L273 389 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 SLC35E3Q7Z769 313 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 ZBTB34Q8NCN2 500 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 OR4D10Q8NGI6 311 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 OR6Q1Q8NGQ2 317 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 GPHA2Q96T91 129 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 TSNAXQ99598 290 aaKnown RBP9.47□□□□□ -0.89
SSBP3-214ENST00000533209 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 TAS2R8Q9NYW2 309 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 KIAA1456Q9P272 454 aa9.47□□□□□ -0.89
SSBP3-214ENST00000533209 ZNF107Q9UII5 783 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-214ENST00000533209 SRRM4A7MD48 611 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms