RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 UTF1Q5T230 341 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 ATRAIDQ6UW56 229 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 AKR1E2Q96JD6 320 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 TOLLIPQ9H0E2 274 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 CALYQ9NYX4 217 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 LINC00312Q9Y6C7 94 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 GPR37O15354 613 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 ST8SIA5O15466 376 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 SPDEFO95238 335 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 IGHV3-7P01780 117 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 RLN2P04090 185 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 CGB3P0DN86 165 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 CGB7P0DN87 165 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 CCL3L1P16619 93 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 ZNF16P17020 682 aaPredicted RBP15.18■□□□□ 0.02
SMPD1-208ENST00000533123 ERVFRD-1P60508 538 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 HTD2P86397 168 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 C17orf58Q2M2W7 97 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 PRSS54Q6PEW0 395 aa15.18■□□□□ 0.02
SMPD1-208ENST00000533123 C22orf46C9J442 243 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 ZFP36P26651 326 aaKnown RBP15.17■□□□□ 0.02
SMPD1-208ENST00000533123 ACOT7LQ6ZUV0 252 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 ZNF645Q8N7E2 425 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 CORO2AQ92828 525 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 GNG12Q9UBI6 72 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 RPUSD1Q9UJJ7 312 aaKnown RBP15.17■□□□□ 0.02
SMPD1-208ENST00000533123 TMED3Q9Y3Q3 217 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 TRBV23-1A0A0A0MS06 115 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 KBTBD11-OT1A0A1B0GTJ5 212 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 MSGN1A6NI15 193 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 LOXL3P58215 753 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 ZNF345Q14585 488 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 KCNRGQ8N5I3 272 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 INO80EQ8NBZ0 244 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-208ENST00000533123 ABHD14BQ96IU4 210 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 PSG11Q9UQ72 335 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 LSM5Q9Y4Y9 91 aaKnown RBP15.17■□□□□ 0.02
SMPD1-208ENST00000533123 BAHCC1Q9P281 2608 aa15.17■□□□□ 0.02
SMPD1-208ENST00000533123 OR2F2O95006 317 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 MBPP02686 304 aaPredicted RBP15.16■□□□□ 0.02
SMPD1-208ENST00000533123 LYL1P12980 280 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 OR2F1Q13607 317 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 BTNL3Q6UXE8 466 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 RAB39BQ96DA2 213 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 ABCA2Q9BZC7 2435 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 A0A0D9SG52 128 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 SLC25A16P16260 332 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 LCN2P80188 198 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 LEAP2Q969E1 77 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 ZNF714Q96N38 554 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 LPAR3Q9UBY5 353 aa15.16■□□□□ 0.02
SMPD1-208ENST00000533123 LOC105371242A0A075B767 164 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 PPIAL4CA0A0B4J2A2 164 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 ZNF729A6NN14 1252 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-208ENST00000533123 KIAA1324LA8MWY0 1029 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-208ENST00000533123 F2RL2O00254 374 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 APOC3P02656 99 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 SERPINE2P07093 398 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 PET100P0DJ07 73 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 PPIAL4GP0DN37 164 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 MORN2Q502X0 79 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 KRTAP1-3Q8IUG1 177 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 AGMATQ9BSE5 352 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 SLC25A32Q9H2D1 315 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 JPT1Q9UK76 154 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 FAM157AC9JC47 383 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 DNASE2O00115 360 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-208ENST00000533123 MMP23AO75900 390 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 IGKV1-39P01597 117 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 IGKV1D-39P04432 117 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 EIF4EBP1Q13541 118 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-208ENST00000533123 NMSQ5H8A3 153 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 TAS2R3Q9NYW6 316 aa15.15■□□□□ 0.02
SMPD1-208ENST00000533123 A0A0G2JRQ6 117 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 K7EPK0 472 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 DEDDO75618 318 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 USF1P22415 310 aaPredicted RBP15.14■□□□□ 0.01
SMPD1-208ENST00000533123 ZNF134P52741 427 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 LINC00205P59089 165 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 RPL30P62888 115 aaKnown RBP15.14■□□□□ 0.01
SMPD1-208ENST00000533123 ZNF585BQ52M93 769 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 OR2B11Q5JQS5 317 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 FAM71E2Q8N5Q1 922 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 C8orf46Q8TAG6 207 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 GAL3ST2Q9H3Q3 398 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 LPAR2Q9HBW0 351 aa15.14■□□□□ 0.01
SMPD1-208ENST00000533123 BCL2L11O43521 198 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 VDAC1P21796 283 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 PRAMEF5Q5TYX0 476 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 PRSS57Q6UWY2 283 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 LY6G5BQ8NDX9 201 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 OR4D5Q8NGN0 318 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 ST8SIA2Q92186 375 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 IL22RA2Q969J5 263 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 MARC2Q969Z3 335 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 Q96MF0 132 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 LIN7CQ9NUP9 197 aaKnown RBP15.13■□□□□ 0.01
SMPD1-208ENST00000533123 ZANQ9Y493 2812 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 CREBBPQ92793 2442 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 ZNF469Q96JG9 3925 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms