RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 P2RX4Q99571 388 aa12.16□□□□□ -0.46
CTSB-220ENST00000531089 MRPS26Q9BYN8 205 aaKnown RBP12.16□□□□□ -0.46
CTSB-220ENST00000531089 AUNIPQ9H7T9 357 aa12.16□□□□□ -0.46
CTSB-220ENST00000531089 ANXA10Q9UJ72 324 aa12.16□□□□□ -0.46
CTSB-220ENST00000531089 RRHO14718 337 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 HLA-DRB1P01911 266 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 IGF1P05019 195 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 OR5H8P0DN80 308 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 VDAC1P21796 283 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 HOXD3P31249 432 aaPredicted RBP12.15□□□□□ -0.46
CTSB-220ENST00000531089 MYCNOSP40205 109 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 LINC00205P59089 165 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
CTSB-220ENST00000531089 TAGLNQ01995 201 aaKnown RBP12.15□□□□□ -0.46
CTSB-220ENST00000531089 PLGLAQ15195 96 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 ANKRD13BQ86YJ7 626 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 PDPNQ86YL7 162 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 SAMD12Q8N8I0 201 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 ZNF383Q8NA42 475 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 FLYWCH2Q96CP2 140 aaKnown RBP12.15□□□□□ -0.46
CTSB-220ENST00000531089 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
CTSB-220ENST00000531089 OR2W1Q9Y3N9 320 aa12.15□□□□□ -0.46
CTSB-220ENST00000531089 J3QRK9 145 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 NFYAP23511 347 aaPredicted RBP12.14□□□□□ -0.47
CTSB-220ENST00000531089 SLC6A1P30531 599 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 CBX5P45973 191 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 RORCP51449 518 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 LUMP51884 338 aaPredicted RBP12.14□□□□□ -0.47
CTSB-220ENST00000531089 BEST4Q8NFU0 473 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 OR51J1Q9H342 316 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 SLC35D1Q9NTN3 355 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 COMMD3Q9UBI1 195 aa12.14□□□□□ -0.47
CTSB-220ENST00000531089 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 SLC22A5O76082 557 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 IGKV1-16P04430 117 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 ARPC4P59998 168 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 CBX3Q13185 183 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 CXorf66Q5JRM2 361 aaPredicted RBP12.13□□□□□ -0.47
CTSB-220ENST00000531089 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 GPR107Q5VW38 600 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 ZNF660Q6AZW8 331 aaPredicted RBP12.13□□□□□ -0.47
CTSB-220ENST00000531089 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 GVQW1Q8N7I0 195 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 ACOT12Q8WYK0 555 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 ADTRPQ96IZ2 230 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 ZNF580Q9UK33 172 aa12.13□□□□□ -0.47
CTSB-220ENST00000531089 SMIM31A0A1B0GVY4 71 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 RPLP1P05386 114 aaKnown RBP12.12□□□□□ -0.47
CTSB-220ENST00000531089 ELANEP08246 267 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 RRASP10301 218 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 LGALS7P47929 136 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 FOXE3Q13461 319 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 PSG5Q15238 335 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 GPR141Q7Z602 305 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 KLHL30-AS1Q8NEE0 82 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 RAX2Q96IS3 184 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 CMTM3Q96MX0 182 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 DUX3Q96PT4 197 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
CTSB-220ENST00000531089 WSB1Q9Y6I7 421 aa12.12□□□□□ -0.47
CTSB-220ENST00000531089 NUDT19A8MXV4 375 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 FCN1O00602 326 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 GABARAPO95166 117 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 SPDEFO95238 335 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 IGHG4P01861 327 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 PTHLHP12272 177 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
CTSB-220ENST00000531089 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
CTSB-220ENST00000531089 CX3CL1P78423 397 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 CTF1Q16619 201 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 RTL8BQ17RB0 113 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 BVESQ8NE79 360 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
CTSB-220ENST00000531089 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 CCL24O00175 119 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 APOA1P02647 267 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 TAS2R20P59543 309 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 CFHR3Q02985 330 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 TMEM267Q0VDI3 215 aaPredicted RBP12.11□□□□□ -0.47
CTSB-220ENST00000531089 MZT2AQ6P582 158 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 TMEM65Q6PI78 240 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 ZNF562Q6V9R5 426 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 MCRIP2Q9BUT9 160 aaKnown RBP12.11□□□□□ -0.47
CTSB-220ENST00000531089 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
CTSB-220ENST00000531089 KMT2CQ8NEZ4 4911 aaKnown RBP12.1□□□□□ -0.47
CTSB-220ENST00000531089 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
CTSB-220ENST00000531089 G3V318 75 aa12.1□□□□□ -0.47
CTSB-220ENST00000531089 SHOXO15266 292 aa12.1□□□□□ -0.47
CTSB-220ENST00000531089 SLC25A17O43808 307 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms