RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 OR7C1O76099 320 aaPredicted RBP11.96□□□□□ -0.49
PCF11-204ENST00000530660 IGLC1P0CG04 106 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 PPIAL4GP0DN37 164 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 TFF2Q03403 129 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 TFF3Q07654 80 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 GCSAMLQ5JQS6 135 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 OR2AE1Q8NHA4 323 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 PP6455Q8WZ26 134 aa11.96□□□□□ -0.49
PCF11-204ENST00000530660 PCDH15Q96QU1 1955 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 SERPINE2P07093 398 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 PMCHL1Q16048 86 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 TRIM61Q5EBN2 209 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 ZNF841Q6ZN19 808 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 SPATA12Q7Z6I5 190 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 SFXN3Q9BWM7 321 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 IL36GQ9NZH8 169 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 CRIM1Q9NZV1 1036 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 MMP17Q9ULZ9 603 aa11.96□□□□□ -0.5
PCF11-204ENST00000530660 HTD2P86397 168 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 MYBPHQ13203 477 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 HIST3H3Q16695 136 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 EBLN2Q6P2I7 272 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 OR1L1Q8NH94 360 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 MRPL13Q9BYD1 178 aaKnown RBP11.95□□□□□ -0.5
PCF11-204ENST00000530660 FRG2CA6NGY1 282 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 H0YJW9 148 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 H3BMH7 237 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 K7EN84 100 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 M0R1X1 148 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 OR1D5P58170 312 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 TGFBR3Q03167 851 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 RNPS1Q15287 305 aaKnown RBP11.95□□□□□ -0.5
PCF11-204ENST00000530660 HLA-BQ31612 363 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 MMD2Q8IY49 270 aa11.95□□□□□ -0.5
PCF11-204ENST00000530660 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 SCO2A0A1W2PP80 73 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 CD300LBA8K4G0 201 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 ALG1L2C9J202 215 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 HSPB6O14558 160 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 PDE6DO43924 150 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 MALLQ13021 153 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 RDH5Q92781 318 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 F2RP25116 425 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 PLCXD2Q0VAA5 305 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 OSR2Q8N2R0 312 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 OR4P4Q8NGL7 312 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 REV3LO60673 3130 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 SAA2-SAA4A0A096LPE2 208 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 H0Y980 276 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 OTX1P32242 354 aaPredicted RBP11.94□□□□□ -0.5
PCF11-204ENST00000530660 C19orf35Q6ZS72 473 aa11.94□□□□□ -0.5
PCF11-204ENST00000530660 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
PCF11-204ENST00000530660 IGKV1-39P01597 117 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 IGKV1D-39P04432 117 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 COX5AP20674 150 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 SRD5A2P31213 254 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 SSTR5P35346 364 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 TCL1AP56279 114 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 GAGE10A6NGK3 116 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 DEGS1O15121 323 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 PDCD6O75340 191 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 COL8A2P25067 703 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 LTBP2Q14767 1821 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 CABIN1Q9Y6J0 2220 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 BMPR1BO00238 502 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 RAMP3O60896 148 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 CLDN1O95832 211 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 IGLV3-1P01715 115 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 NPY1RP25929 384 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 C1orf61Q13536 156 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 PLA2G2FQ9BZM2 168 aa11.93□□□□□ -0.5
PCF11-204ENST00000530660 S100GP29377 79 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 RSPO1Q2MKA7 263 aaPredicted RBP11.92□□□□□ -0.5
PCF11-204ENST00000530660 ZNF439Q8NDP4 499 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 NAA38Q9BRA0 125 aaKnown RBP11.92□□□□□ -0.5
PCF11-204ENST00000530660 LRRC61Q9BV99 259 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 ABI3Q9P2A4 366 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 PILRBQ9UKJ0 227 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 CHD9Q3L8U1 2897 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 hDV102S1A0JD36 115 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 COL9A1P20849 921 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 DRD1P21728 446 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 MSR1P21757 451 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 PPOXP50336 477 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
PCF11-204ENST00000530660 TNXAQ16473 311 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.92□□□□□ -0.5
PCF11-204ENST00000530660 TIMM9Q9Y5J7 89 aa11.92□□□□□ -0.5
PCF11-204ENST00000530660 A0A087X0K7 114 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms