RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 IGLV3-19P01714 112 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 ESDP10768 282 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 ALOX5APP20292 161 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 TSPEAR-AS2P59090 65 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 SPCS3P61009 180 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 DEFB134Q4QY38 66 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 NOXRED1Q6NXP6 359 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 TMEM86BQ8N661 226 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR2T27Q8NH04 317 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 SLC35B4Q969S0 331 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 IGF2BP2-AS1Q96M15 143 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 PRAP1Q96NZ9 151 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 VPREB3Q9UKI3 123 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 ZBED9Q6R2W3 1325 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 NID2Q14112 1375 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 CLDN24A6NM45 220 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 ZNF22P17026 224 aaPredicted RBP3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 ERVS71-1P61550 626 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 BASP1P80723 227 aaKnown RBP3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 HOXC5Q00444 222 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 SRSF6Q13247 344 aaKnown RBP3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 WDR59Q6PJI9 974 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 C5orf46Q6UWT4 87 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 C1orf158Q8N1D5 194 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 DEFB125Q8N687 156 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 CLDN22Q8N7P3 220 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 MUC7Q8TAX7 377 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 CCDC94Q9BW85 323 aaPredicted RBP3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 C11orf1Q9H5F2 150 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 ANAPC10Q9UM13 185 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 ZNF337Q9Y3M9 751 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 PXMP4Q9Y6I8 212 aa3.43□□□□□ -1.86
CAPRIN1-208ENST00000530008 THADAQ6YHU6 1953 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR6C6A6NF89 314 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR5G3P0C626 314 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 IFITM2Q01629 132 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 FAM201AQ5SY85 155 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 RASL11AQ6T310 242 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 ALKAL1Q6UXT8 129 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR4K13Q8NH42 304 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 CDC26Q8NHZ8 85 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 RAD51AP1Q96B01 352 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR8B2Q96RD0 313 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 CCL13Q99616 98 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 SNX12Q9UMY4 172 aa3.42□□□□□ -1.86
CAPRIN1-208ENST00000530008 LOC102725191A0A1B0GVB3 256 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 SLC25A16P16260 332 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 NPPCP23582 126 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 CRYBB3P26998 211 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 CST6Q15828 149 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 PYDC2Q56P42 97 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 CCDC121Q6ZUS5 278 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR11H1Q8NG94 326 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR1L8Q8NGR8 309 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR10A6Q8NH74 314 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 LMX1AQ8TE12 382 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 ANKRD7Q92527 254 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 GNPNAT1Q96EK6 184 aaPredicted RBP3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 COQ4Q9Y3A0 265 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 PTPRJQ12913 1337 aa3.41□□□□□ -1.86
CAPRIN1-208ENST00000530008 COL1A2P08123 1366 aa3.4□□□□□ -1.86
CAPRIN1-208ENST00000530008 DHRS12A0PJE2 317 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 OR4C45A6NMZ5 311 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 SLC17A3O00476 420 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 PSCAO43653 123 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 CHP2O43745 196 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 FAM228BP0C875 321 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 BAMBIQ13145 260 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 HTR4Q13639 388 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 AKIRIN2Q53H80 203 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 AMTNQ6UX39 209 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 CALHM3Q86XJ0 350 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 UMODL1-AS1Q8N2C9 162 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 LRRC25Q8N386 305 aaPredicted RBP3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 LHFPL5Q8TAF8 219 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 FNDC9Q8TBE3 224 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 C12orf43Q96C57 262 aaKnown RBP3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 MGLLQ99685 303 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 HIGD2AQ9BW72 106 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 IL20Q9NYY1 176 aa3.4□□□□□ -1.87
CAPRIN1-208ENST00000530008 COL18A1P39060 1754 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 ADAMTSL1Q8N6G6 1762 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 EEF1E1-BLOC1S5C9J1V9 151 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 COX7A2LO14548 114 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 LY6HO94772 140 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 CD5P06127 495 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 RNASE2P10153 161 aaKnown RBP3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 NEFHP12036 1026 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 HSD11B1P28845 292 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 MRPS25P82663 173 aaKnown RBP3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 SPIN3Q5JUX0 258 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 RAB2BQ8WUD1 216 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 MND1Q9BWT6 205 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 C16orf95Q9H693 158 aa3.39□□□□□ -1.87
CAPRIN1-208ENST00000530008 CXorf21Q9HAI6 301 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms