RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SPIN2AQ99865 258 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 SPIN2BQ9BPZ2 258 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-216ENST00000530004 MED13LQ71F56 2210 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 LOC105371242A0A075B767 164 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 SAA2-SAA4A0A096LPE2 208 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 PPIAL4CA0A0B4J2A2 164 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 A0A1W2PPH5 198 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 C17orf98A8MV24 154 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 B4DSR2 109 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 H0YIZ8 118 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 L7N2F9 121 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 SAA2P0DJI9 122 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-216ENST00000530004 PPIAL4GP0DN37 164 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 IGHV1-8P0DP01 117 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 RPA2P15927 270 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 LPAR6P43657 344 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 ZNF816Q0VGE8 651 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-216ENST00000530004 NMSQ5H8A3 153 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-216ENST00000530004 ODF3L1Q8IXM7 274 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-216ENST00000530004 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
TTC39A-216ENST00000530004 C8orf46Q8TAG6 207 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 RNF126Q9BV68 326 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 LPAR2Q9HBW0 351 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
TTC39A-216ENST00000530004 A0A0G2JRQ6 117 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
TTC39A-216ENST00000530004 TSC22D2O75157 780 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 SNAPC5O75971 98 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 PET100P0DJ07 73 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 IGHV4-31P0DP07 118 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 IFITM2Q01629 132 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 PAX2Q02962 417 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 NCR3LG1Q68D85 454 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 PRSS54Q6PEW0 395 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 FOXRED2Q8IWF2 684 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 TNFSF18Q9UNG2 199 aa11.75□□□□□ -0.53
TTC39A-216ENST00000530004 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
TTC39A-216ENST00000530004 YLPM1P49750 1951 aaKnown RBP11.75□□□□□ -0.53
TTC39A-216ENST00000530004 MSMBP08118 114 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 AKR1C2P52895 323 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 THOC7Q6I9Y2 204 aaKnown RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 LINC01356Q8N9X3 169 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 LSM10Q969L4 123 aaKnown RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 ZNF251Q9BRH9 671 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 LSM5Q9Y4Y9 91 aaKnown RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 SESN1Q9Y6P5 492 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 A0A087X0M5 115 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 A0A1B0GX30 115 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 S1PR2O95136 353 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 IGKV1-5P01602 117 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 LIPFP07098 398 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 EPHA1P21709 976 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 AP2S1P53680 142 aaPredicted RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 OR1S1Q8NH92 325 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 RRNAD1Q96FB5 475 aaKnown RBP11.74□□□□□ -0.53
TTC39A-216ENST00000530004 MMP26Q9NRE1 261 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 ONECUT1Q9UBC0 465 aa11.74□□□□□ -0.53
TTC39A-216ENST00000530004 IGHV2-70DA0A0C4DH43 119 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 J3QR06 171 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 K7EPK0 472 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 KCNAB3O43448 404 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
TTC39A-216ENST00000530004 FCGR3BO75015 233 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 LYL1P12980 280 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 SMCO1Q147U7 214 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 IZUMO4Q1ZYL8 232 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-216ENST00000530004 OR10X1Q8NGY0 326 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 CD300LFQ8TDQ1 290 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 S1PR3Q99500 378 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 TMEM133Q9H2Q1 129 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 SLA2Q9H6Q3 261 aa11.73□□□□□ -0.53
TTC39A-216ENST00000530004 RNF222A6NCQ9 220 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 DEDDO75618 318 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 RBP4P02753 201 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 RLN2P04090 185 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 C4BPBP20851 252 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 S100A11P31949 105 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 THBS3P49746 956 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms