RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 VPREB3Q9UKI3 123 aa6.42□□□□□ -1.38
SSBP3-211ENST00000528787 HILPDAQ9Y5L2 63 aa6.42□□□□□ -1.38
SSBP3-211ENST00000528787 HIVEP1P15822 2718 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 TIMM23O14925 209 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 FGF16O43320 207 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 PRAF2O60831 178 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 NDUFB6O95139 128 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 DHFRP00374 187 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 HPRT1P00492 218 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 F2RP25116 425 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 GNRHRP30968 328 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 IER3P46695 156 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 RAG2P55895 527 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 PIGPP57054 158 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 HILS1P60008 231 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 VMA21Q3ZAQ7 101 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 PLET1Q6UQ28 207 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 CADM3Q8N126 398 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 CENPSQ8N2Z9 138 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 OR5AN1Q8NGI8 311 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 OR56B4Q8NH76 319 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 SMR3AQ99954 134 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 GON7Q9BXV9 100 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 NPFFR1Q9GZQ6 430 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 ALX4Q9H161 411 aaPredicted RBP6.41□□□□□ -1.38
SSBP3-211ENST00000528787 RANBP3Q9H6Z4 567 aaPredicted RBP6.41□□□□□ -1.38
SSBP3-211ENST00000528787 PLEKHA2Q9HB19 425 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 GPN1Q9HCN4 374 aaPredicted RBP6.41□□□□□ -1.38
SSBP3-211ENST00000528787 SLC35D1Q9NTN3 355 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 RNF150Q9ULK6 438 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 TCF19Q9Y242 345 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 NUBP2Q9Y5Y2 271 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 CELSR1Q9NYQ6 3014 aa6.41□□□□□ -1.38
SSBP3-211ENST00000528787 IGHV3OR16-10A0A075B7F0 116 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 A0A1B0GUS0 222 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 A0A1W2PPE3 182 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 DUXBA0A1W2PPF3 345 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 A0A1W2PPI3 338 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 A0A1W2PRD5 423 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 A0A1W2PRF3 423 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 A0A1W2PRM7 423 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 H0Y980 276 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 H3BUX3 64 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 SHOXO15266 292 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 MPPED1O15442 326 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 KCNAB3O43448 404 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 PGLYRP1O75594 196 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-211ENST00000528787 ACTL6BO94805 426 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 OR2F2O95006 317 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 IGHV3-7P01780 117 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 RLN1P04808 185 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 NQO2P16083 231 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 TMEM11P17152 192 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 SLC6A1P30531 599 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
SSBP3-211ENST00000528787 EBI3Q14213 229 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 RGS21Q2M5E4 152 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 DEFB112Q30KQ8 113 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 RUSC1-AS1Q66K80 236 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 LHFPL4Q7Z7J7 247 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 FAM219AQ8IW50 185 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 ODF3L1Q8IXM7 274 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 OR13C8Q8NGS7 320 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 OR4A5Q8NH83 315 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 MARCH1Q8TCQ1 289 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 IL22RA2Q969J5 263 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 SDHCQ99643 169 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-211ENST00000528787 NABP2Q9BQ15 211 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 GSX1Q9H4S2 264 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-211ENST00000528787 CCL28Q9NRJ3 127 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 FKBP11Q9NYL4 201 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 GPR132Q9UNW8 380 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 MOB4Q9Y3A3 225 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 ZANQ9Y493 2812 aa6.4□□□□□ -1.38
SSBP3-211ENST00000528787 C3orf85A0A1B0GTC6 90 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 FAM90A9PA6NNJ1 464 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 H0YJW9 148 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 SLC31A2O15432 143 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 CYB5BO43169 146 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 FCGR3BO75015 233 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TSPAN9O75954 239 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 LY86O95711 162 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 IGKV1D-33P01593 117 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 IGKV1-33P01594 117 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TCRBP04435 133 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RNASE1P07998 156 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 SNRNP70P08621 437 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF735P0CB33 412 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 CT45A6P0DMU7 189 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 CT45A5P0DMU8 189 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 CT45A7P0DMV0 189 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RPS16P62249 146 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 PLGLAQ15195 96 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TUSC1Q2TAM9 212 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM177Q53S58 311 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RPL39P5Q59GN2 51 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TMED4Q7Z7H5 227 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TBC1D26Q86UD7 250 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms