RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 TIMP4Q99727 224 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 CCL28Q9NRJ3 127 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 NEUROG3Q9Y4Z2 214 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 LHFPL6Q9Y693 200 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 PIN1P1O15428 100 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 GPX4P36969 197 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-218ENST00000528232 EWSR1Q01844 656 aaKnown RBP eCLIP6.24□□□□□ -1.41
CTNND1-218ENST00000528232 LDLRAD2Q5SZI1 272 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 SLC25A40Q8TBP6 338 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-218ENST00000528232 SSBP4Q9BWG4 385 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-218ENST00000528232 TUBD1Q9UJT1 453 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 TRAV38-1A0A0B4J264 116 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 DLX1P56177 255 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 EGR4Q05215 589 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 SLC35E4Q6ICL7 350 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 GUCD1Q96NT3 240 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 SLC25A22Q9H936 323 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 ONECUT1Q9UBC0 465 aa6.24□□□□□ -1.41
CTNND1-218ENST00000528232 MGAMO43451 1857 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 BRWD1Q9NSI6 2320 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 A0A1W2PRS3 328 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TMEM250H0YL14 139 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 CDIPTO14735 213 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 GNG7O60262 68 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 AGFG2O95081 481 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 S1PR2O95136 353 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TSPAN13O95857 204 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 GZMHP20718 246 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 FNDC7Q5VTL7 733 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 C19orf48Q6RUI8 117 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 SSX8Q7RTT4 187 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 CYB561D1Q8N8Q1 229 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 OR4X2Q8NGF9 303 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TMEM54Q969K7 222 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 VWCEQ96DN2 955 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 CHODLQ9H9P2 273 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 RNF122Q9H9V4 155 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 ELOVL5Q9NYP7 299 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 IGKV3D-11A0A0A0MRZ8 115 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 DANCRP0C864 163 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 HKR1P10072 659 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 ZNF658BQ4V348 819 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 C5orf17Q8NAS9 161 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 RNF7Q9UBF6 113 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 NPTNQ9Y639 398 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 HS3ST3B1Q9Y662 390 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 DOCK4Q8N1I0 1966 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TET1Q8NFU7 2136 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 FBLL1A6NHQ2 334 aaKnown RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 CHST1O43916 411 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TNFSF13O75888 250 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 FGF8P55075 233 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TMEM50BP56557 158 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 SLC35B1P78383 322 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 EFNB1P98172 346 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TWIST1Q15672 202 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 C1orf194Q5T5A4 169 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 LINC00114Q6XXX2 140 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 FAM219AQ8IW50 185 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 COLQQ9Y215 455 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 A0A1W2PQM1 296 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 TBX6O95947 436 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 MELTFP08582 738 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 FGF12P61328 243 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 RPL30P62888 115 aaKnown RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 DGAT2L7PQ6IED9 249 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 ZNF880Q6PDB4 577 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 SLC23A3Q6PIS1 610 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 NFAM1Q8NET5 270 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 PLPPR2Q96GM1 343 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 HSD17B10Q99714 261 aaKnown RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 MRPL18Q9H0U6 180 aaKnown RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 NPDC1Q9NQX5 325 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-218ENST00000528232 ZNF257Q9Y2Q1 563 aa6.23□□□□□ -1.41
CTNND1-218ENST00000528232 NKX2-6A6NCS4 301 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 ASCL5Q7RTU5 278 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 LYZL2Q7Z4W2 148 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 PDPNQ86YL7 162 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 RPEQ96AT9 228 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 HDHD3Q9BSH5 251 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-218ENST00000528232 SEBOXQ9HB31 216 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-218ENST00000528232 A0A1B0GWB2 263 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 C3orf80F5H4A9 247 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 CSN3P07498 182 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 ESDP10768 282 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 MRPS11P82912 194 aaKnown RBP6.22□□□□□ -1.41
CTNND1-218ENST00000528232 C10orf128Q5T292 105 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 MOGAT3Q86VF5 341 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 FAM117AQ9C073 453 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 ZNF665Q9H7R5 613 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 HSF4Q9ULV5 492 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 UFC1Q9Y3C8 167 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 MPDU1O75352 247 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 MEF2BQ02080 365 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-218ENST00000528232 VSTM2AQ8TAG5 236 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 PCGF1Q9BSM1 259 aa6.22□□□□□ -1.41
CTNND1-218ENST00000528232 F12P00748 615 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms