RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 EIF4EBP1Q13541 118 aaPredicted RBP16.58■□□□□ 0.24
CD44-222ENST00000526025 LHFPL1Q86WI0 220 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 PDPNQ86YL7 162 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 ZNF383Q8NA42 475 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 SECTM1Q8WVN6 248 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 HSD17B10Q99714 261 aaKnown RBP16.58■□□□□ 0.24
CD44-222ENST00000526025 RNF5Q99942 180 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 TINAGL1Q9GZM7 467 aaPredicted RBP16.58■□□□□ 0.24
CD44-222ENST00000526025 SLC5A7Q9GZV3 580 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 C1RLQ9NZP8 487 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 MOB4Q9Y3A3 225 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 FBN1P35555 2871 aaKnown RBP16.57■□□□□ 0.24
CD44-222ENST00000526025 TMEM89A2RUT3 159 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 AP3S2P59780 193 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 FBLN7Q53RD9 439 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 LPCAT3Q6P1A2 487 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 ZNF66Q6ZN08 573 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 DDB2Q92466 427 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 C19orf24Q9BVV8 132 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 FXYD6Q9H0Q3 95 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 AKIP1Q9NQ31 210 aa16.57■□□□□ 0.24
CD44-222ENST00000526025 J3QRK9 145 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 RRASP10301 218 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 FXYD4P59646 89 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 MFSD4AQ8N468 514 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 DRAXINQ8NBI3 349 aaPredicted RBP16.56■□□□□ 0.24
CD44-222ENST00000526025 BVESQ8NE79 360 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 OR4C13Q8NGP0 309 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 OR4F5Q8NH21 305 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 S100ZQ8WXG8 99 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 C16orf95Q9H693 158 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
CD44-222ENST00000526025 A0A1B0GUS0 222 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 RNF212BA8MTL3 300 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 GNRHRP30968 328 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 ECI1P42126 302 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 RAG2P55895 527 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 RELBQ01201 579 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 KLF9Q13886 244 aaPredicted RBP16.55■□□□□ 0.24
CD44-222ENST00000526025 RTL8BQ17RB0 113 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 AADACL3Q5VUY0 350 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 GLDNQ6ZMI3 551 aaPredicted RBP16.55■□□□□ 0.24
CD44-222ENST00000526025 Q8N2B8 174 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 OR4D10Q8NGI6 311 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 OR4C16Q8NGL9 310 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 SLC2A8Q9NY64 477 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 MMP24Q9Y5R2 645 aa16.55■□□□□ 0.24
CD44-222ENST00000526025 DISC1C4P0D8 188 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 AMY2AP04746 511 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 ZNF735P0CB33 412 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 FAUP35544 74 aaKnown RBP16.54■□□□□ 0.24
CD44-222ENST00000526025 COMPP49747 757 aaPredicted RBP16.54■□□□□ 0.24
CD44-222ENST00000526025 FOXL1Q12952 345 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 CBX3Q13185 183 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 HNF4GQ14541 408 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 C11orf88Q6PI97 169 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 ZNF818PQ6ZRF7 136 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 Q6ZSV7 163 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 KCTD9Q7L273 389 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 SLC38A6Q8IZM9 456 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 TOMM5Q8N4H5 51 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 C5orf56Q8N8D9 126 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 NPBQ8NG41 125 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 TERB2Q8NHR7 220 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 SDHCQ99643 169 aaPredicted RBP16.54■□□□□ 0.24
CD44-222ENST00000526025 PRRT1Q99946 306 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 PRSS22Q9GZN4 317 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 PLSCR3Q9NRY6 295 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 SLC35D1Q9NTN3 355 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 PRELID3BQ9Y3B1 194 aa16.54■□□□□ 0.24
CD44-222ENST00000526025 LINC00473A8K010 186 aa16.53■□□□□ 0.24
CD44-222ENST00000526025 H7C2Y5 167 aa16.53■□□□□ 0.24
CD44-222ENST00000526025 GPR31O00270 319 aa16.53■□□□□ 0.24
CD44-222ENST00000526025 AMY1AP04745 511 aa16.53■□□□□ 0.24
CD44-222ENST00000526025 CMTM1Q8IZ96 169 aa16.53■□□□□ 0.24
CD44-222ENST00000526025 ZNF486Q96H40 463 aaPredicted RBP16.53■□□□□ 0.24
CD44-222ENST00000526025 RSRP1Q9BUV0 290 aa16.53■□□□□ 0.24
CD44-222ENST00000526025 NDUFA3O95167 84 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 SPDEFO95238 335 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 KIR2DS2P43631 304 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 CATR1Q13166 79 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 SURF2Q15527 256 aaPredicted RBP16.52■□□□□ 0.24
CD44-222ENST00000526025 TMEM177Q53S58 311 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 Q8N9W7 124 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 FLYWCH2Q96CP2 140 aaKnown RBP16.52■□□□□ 0.24
CD44-222ENST00000526025 ZNF702PQ9H963 129 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 BEX1Q9HBH7 125 aa16.52■□□□□ 0.24
CD44-222ENST00000526025 LIN7CQ9NUP9 197 aaKnown RBP16.52■□□□□ 0.24
CD44-222ENST00000526025 RBFOX2O43251 390 aaKnown RBP eCLIP16.51■□□□□ 0.23
CD44-222ENST00000526025 IGKV1-16P04430 117 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 S100GP29377 79 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 LGALS7P47929 136 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 LINC00205P59089 165 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 RPL30P62888 115 aaKnown RBP16.51■□□□□ 0.23
CD44-222ENST00000526025 MMDQ15546 238 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 TRIQKQ629K1 86 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 OSR1Q8TAX0 266 aaPredicted RBP16.51■□□□□ 0.23
CD44-222ENST00000526025 TSNAXQ99598 290 aaKnown RBP16.51■□□□□ 0.23
CD44-222ENST00000526025 CCDC32Q9BV29 185 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms