RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RAX2Q96IS3 184 aa10.04□□□□□ -0.8
TRAPPC4-205ENST00000525079 FAM103A1Q9BTL3 118 aaKnown RBP10.04□□□□□ -0.8
TRAPPC4-205ENST00000525079 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
TRAPPC4-205ENST00000525079 ETV7Q9Y603 341 aa10.04□□□□□ -0.8
TRAPPC4-205ENST00000525079 CCL24O00175 119 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 SLC25A17O43808 307 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 SCGNO76038 276 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 DIRAS3O95661 229 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 FCER2P06734 321 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 OR5H8P0DN80 308 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 EGR2P11161 476 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 PTHLHP12272 177 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 NFYAP23511 347 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 PSMB8P28062 276 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 RPS19P39019 145 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 MYCNOSP40205 109 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 CDX1P47902 265 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 PITPNAQ00169 270 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 TIMM50Q3ZCQ8 353 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 ZNF660Q6AZW8 331 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 TMEM65Q6PI78 240 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 PDPNQ86YL7 162 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 RNF152Q8N8N0 203 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 BVESQ8NE79 360 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 CASTOR1Q8WTX7 329 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 FLYWCH2Q96CP2 140 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 RCC1LQ96I51 464 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 P2RX4Q99571 388 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 TSNAXQ99598 290 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 RNF5Q99942 180 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 DCSTAMPQ9H295 470 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 NECAP2Q9NVZ3 263 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 ZNF580Q9UK33 172 aa10.03□□□□□ -0.8
TRAPPC4-205ENST00000525079 A0A1W2PN81 502 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 CA2P00918 260 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 HOXD3P31249 432 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 CHRNA7P36544 502 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 SCAND1P57086 179 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 KIAA0141Q14154 515 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 CNIH2Q6PI25 160 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 PPP1R27Q86WC6 154 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 GVQW1Q8N7I0 195 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 GNB4Q9HAV0 340 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 DIABLOQ9NR28 239 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 AURKAIP1Q9NWT8 199 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
TRAPPC4-205ENST00000525079 LINC00473A8K010 186 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 SOX15O60248 233 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 IGLV1-40P01703 118 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 IGLV2-23P01705 113 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 CTXN2P0C2S0 81 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 SLC6A1P30531 599 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 LUMP51884 338 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 KRTAP10-11P60412 298 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 GNB1P62873 340 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 UNQ5815/PRO19632Q6UWF5 114 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 ZNF491Q8N8L2 437 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 MINDY2Q8NBR6 621 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 MRAPQ8TCY5 172 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 AUNIPQ9H7T9 357 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 OR2W1Q9Y3N9 320 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 NUBP2Q9Y5Y2 271 aa10.01□□□□□ -0.81
TRAPPC4-205ENST00000525079 IGKV1D-13A0A0B4J2D9 117 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 TRIM64CA6NLI5 447 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 SRRM4A7MD48 611 aaKnown RBP10□□□□□ -0.81
TRAPPC4-205ENST00000525079 ARPC1BO15143 372 aaKnown RBP10□□□□□ -0.81
TRAPPC4-205ENST00000525079 SHOXO15266 292 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 TUSC2O75896 110 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 SPDEFO95238 335 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 IGKV1-13P0DP09 117 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 DUTP33316 252 aaKnown RBP10□□□□□ -0.81
TRAPPC4-205ENST00000525079 RAB9AP51151 201 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 ARPC4P59998 168 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 NCS1P62166 190 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 CBX3Q13185 183 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 FXYD3Q14802 87 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 RTL8BQ17RB0 113 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 C19orf54Q5BKX5 351 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 LFNGQ8NES3 379 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 BEST4Q8NFU0 473 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 GRPEL2Q8TAA5 225 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 C4orf3Q8WVX3 66 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 HARBI1Q96MB7 349 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 MS4A10Q96PG2 267 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 FUNDC2Q9BWH2 189 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-205ENST00000525079 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
TRAPPC4-205ENST00000525079 A0A0A6YYH2 397 aa9.99□□□□□ -0.81
TRAPPC4-205ENST00000525079 A6NJ64 397 aa9.99□□□□□ -0.81
TRAPPC4-205ENST00000525079 CNIH1O95406 144 aa9.99□□□□□ -0.81
TRAPPC4-205ENST00000525079 DUS4LO95620 317 aaKnown RBP9.99□□□□□ -0.81
TRAPPC4-205ENST00000525079 CRYZL1O95825 349 aa9.99□□□□□ -0.81
TRAPPC4-205ENST00000525079 HLA-DQB1P01920 261 aa9.99□□□□□ -0.81
TRAPPC4-205ENST00000525079 CRYGBP07316 175 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms