RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SLC7A11Q9UPY5 501 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 PRORSD1PA6NEY8 169 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 CPSF4LA6NMK7 179 aaKnown RBP4.74□□□□□ -1.65
NEDD8-203ENST00000524927 HSD17B1P14061 328 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 HTD2P86397 168 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 DUSP7Q16829 419 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 UTF1Q5T230 341 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 ZNF57Q68EA5 555 aaPredicted RBP4.74□□□□□ -1.65
NEDD8-203ENST00000524927 FAHD1Q6P587 224 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 SLC38A6Q8IZM9 456 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 OR1L6Q8NGR2 347 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 SGK3Q96BR1 496 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 REEP6Q96HR9 211 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 C16orf45Q96MC5 204 aaPredicted RBP4.74□□□□□ -1.65
NEDD8-203ENST00000524927 C6orf62Q9GZU0 229 aaPredicted RBP4.74□□□□□ -1.65
NEDD8-203ENST00000524927 SYT4Q9H2B2 425 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 RERGLQ9H628 205 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 NRN1Q9NPD7 142 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 CYB5R1Q9UHQ9 305 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 NUBP2Q9Y5Y2 271 aa4.74□□□□□ -1.65
NEDD8-203ENST00000524927 TRAV25A0A0B4J276 109 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 C2orf70A6NJV1 201 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 C5orf58C9J3I9 102 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 SCGB2A1O75556 95 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 FGF4P08620 206 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 FCGR3AP08637 254 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 MIFP14174 115 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 NPY1RP25929 384 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 RBM34P42696 430 aaKnown RBP4.73□□□□□ -1.65
NEDD8-203ENST00000524927 CDKN2CP42773 168 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 OR1E2P47887 323 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 SERPINB9P50453 376 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 DNAJB13P59910 316 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
NEDD8-203ENST00000524927 EMX2Q04743 252 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 GRK1Q15835 563 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 LRRC36Q1X8D7 754 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 SLC36A3Q495N2 470 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 KLHL12Q53G59 568 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 ACTBL2Q562R1 376 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 MESTQ5EB52 335 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 TTC32Q5I0X7 151 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 HAGHLQ6PII5 290 aaPredicted RBP4.73□□□□□ -1.65
NEDD8-203ENST00000524927 OR8B12Q8NGG6 310 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 PFN4Q8NHR9 129 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 ASB9Q96DX5 294 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 CCDC28BQ9BUN5 200 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 POLDIP2Q9Y2S7 368 aa4.73□□□□□ -1.65
NEDD8-203ENST00000524927 A0A0A6YYD4 124 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 OR5B21A6NL26 309 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 LOC110117498-PIK3R3F6TDL0 507 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 H3BUA1 57 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 RS1O15537 224 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 RRASP10301 218 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 SLC2A1P11166 492 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 NFYBP25208 207 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 S100A3P33764 101 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 PTGFRP43088 359 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 DR1Q01658 176 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 BNIP1Q12981 228 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 MMDQ15546 238 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 ANKDD1AQ495B1 522 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 AKIRIN2Q53H80 203 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 ZNF343Q6P1L6 599 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 ACTRT1Q8TDG2 376 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 PIGCQ92535 297 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 MAL2Q969L2 176 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 PKNOX2Q96KN3 472 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 CNN2Q99439 309 aaKnown RBP4.72□□□□□ -1.65
NEDD8-203ENST00000524927 NAPGQ99747 312 aaPredicted RBP4.72□□□□□ -1.65
NEDD8-203ENST00000524927 RGCCQ9H4X1 137 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 EMCNQ9ULC0 261 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 N6AMT1Q9Y5N5 214 aa4.72□□□□□ -1.65
NEDD8-203ENST00000524927 RPL37AP8A6NKH3 93 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 TYROBPO43914 113 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 TRBV12-3P01733 135 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 MYL2P10916 166 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 UCP1P25874 307 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 CRABP1P29762 137 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 ALDH3A1P30838 453 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 MAP2K4P45985 399 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 REG1BP48304 166 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 PRKXP51817 358 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 NDPQ00604 133 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 CEACAM21Q3KPI0 293 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 SLX4IPQ5VYV7 408 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 DNM1P34Q6PK57 102 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 KRTAP7-1Q8IUC3 87 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 BEST4Q8NFU0 473 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 OR5A2Q8NGI9 324 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 OR6T1Q8NGN1 323 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 OR10X1Q8NGY0 326 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 RAB3CQ96E17 227 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 Q96M85 177 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 NMNAT1Q9HAN9 279 aaPredicted RBP4.71□□□□□ -1.66
NEDD8-203ENST00000524927 TPT1P8Q9HAU6 139 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 SPATA2Q9UM82 520 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 PSG11Q9UQ72 335 aa4.71□□□□□ -1.66
NEDD8-203ENST00000524927 FAM230AA0A1W2PPH8 454 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms