RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PECRQ9BY49 303 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 SELENOIQ9C0D9 397 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 NXF2Q9GZY0 626 aaKnown RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 SIRPDQ9H106 197 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 METTL9Q9H1A3 318 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 PLGRKTQ9HBL7 147 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 NEK6Q9HC98 313 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 VCX3AQ9NNX9 186 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RASL12Q9NYN1 266 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 CKLFQ9UBR5 152 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MIOXQ9UGB7 285 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 OPN4Q9UHM6 478 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ST3GAL6Q9Y274 331 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 SOX21Q9Y651 276 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 HIVEP2P31629 2446 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 TNCP24821 2201 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 A0A075B6Q4 140 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV2-70DA0A0C4DH43 119 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PN81 502 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 MEIS3P1A6NDR6 274 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM235A6NFC5 223 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CCDC160A6NGH7 325 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RNASEK-C17orf49H0YIS7 233 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 C15orf65H3BRN8 121 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 MFNGO00587 321 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PDCD5O14737 125 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SH2D1BO14796 132 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 DEGS1O15121 323 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CD5LO43866 347 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SSX5O60225 188 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 HPGDSO60760 199 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF780AO75290 641 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR7C1O76099 320 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 NAPSAO96009 420 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CYB5AP00167 134 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 TGFAP01135 160 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 HLA-DQB1P01920 261 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CSN2P05814 226 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 MSMBP08118 114 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 UBBP0CG47 229 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 GTF2F2P13984 249 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CD99P14209 185 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RCC1P18754 421 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ELK1P19419 428 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OMGP23515 440 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CDK2P24941 298 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PAX6P26367 422 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 BLVRBP30043 206 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SSTR5P35346 364 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CHRNA7P36544 502 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 NPY4RP50391 375 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CAPZA1P52907 286 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ARF6P62330 175 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PAX5Q02548 391 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PAX8Q06710 450 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SCN1BQ07699 218 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 KLRD1Q13241 179 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 EDDM3AQ14507 147 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 HERPUD1Q15011 391 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 GRK1Q15835 563 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 MPV17LQ2QL34 196 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CNPY1Q3B7I2 92 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 KLF17Q5JT82 389 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SPIN3Q5JUX0 258 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 LDLRAD2Q5SZI1 272 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ATAD3CQ5T2N8 411 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 METTL11BQ5VVY1 283 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RAB12Q6IQ22 244 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 HCP5Q6MZN7 132 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF880Q6PDB4 577 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SLC36A1Q7Z2H8 476 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR2W3Q7Z3T1 314 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF554Q86TJ5 538 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 LINC00596Q86U02 117 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 LAX1Q8IWV1 398 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 Q8IYB0 196 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR8H2Q8N162 312 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 GAPTQ8N292 157 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PNKDQ8N490 385 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF561Q8N587 486 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SPICQ8N5J4 248 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 GVQW1Q8N7I0 195 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR8B3Q8NGG8 313 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR10R2Q8NGX6 335 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR4K15Q8NH41 348 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 KCNG3Q8TAE7 436 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 C8orf46Q8TAG6 207 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CCDC107Q8WV48 283 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 C17orf50Q8WW18 174 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 MAFIPQ8WZ33 124 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 H1FXQ92522 213 aaKnown RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 TNFRSF14Q92956 283 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PTX4Q96A99 478 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CPNE2Q96FN4 548 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SGK494Q96LW2 274 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 OR8B2Q96RD0 313 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 TBX15Q96SF7 602 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 S100A13Q99584 98 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 BCL7BQ9BQE9 202 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 FAAP24Q9BTP7 215 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms