RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 REG4Q9BYZ8 158 aa12.26□□□□□ -0.45
HMBOX1-210ENST00000523613 TMED3Q9Y3Q3 217 aa12.26□□□□□ -0.45
HMBOX1-210ENST00000523613 GCN1Q92616 2671 aaKnown RBP12.26□□□□□ -0.45
HMBOX1-210ENST00000523613 ARHGAP32A7KAX9 2087 aa12.26□□□□□ -0.45
HMBOX1-210ENST00000523613 BUB1B-PAK6H3BSN5 160 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 FCGR3BO75015 233 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 MMP9P14780 707 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 LINC00205P59089 165 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 KLRD1Q13241 179 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 ZNF585BQ52M93 769 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 RNASE11Q8TAA1 199 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 ST6GALNAC6Q969X2 333 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 C1orf159Q96HA4 380 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 ANKRD17O75179 2603 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 RAMP3O60896 148 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 ATG12O94817 140 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 CT45A6P0DMU7 189 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 CT45A5P0DMU8 189 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 CT45A7P0DMV0 189 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 CYCSP99999 105 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 PAX8Q06710 450 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 ZNF816Q0VGE8 651 aaPredicted RBP12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 HCP5Q6MZN7 132 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 ZNF383Q8NA42 475 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 OR4P4Q8NGL7 312 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 DDB2Q92466 427 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 SEC22AQ96IW7 307 aa12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 MRPL20Q9BYC9 149 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-210ENST00000523613 TRAV20A0A0B4J274 112 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 RBFOX2O43251 390 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 VDAC1P21796 283 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 HTR1DP28221 377 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 REG1BP48304 166 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 AKR1C2P52895 323 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 BRWD1-AS2P59051 145 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 SRSF4Q08170 494 aaKnown RBP12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 RTL8BQ17RB0 113 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 IAH1Q2TAA2 248 aaPredicted RBP12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 KRTAP1-3Q8IUG1 177 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 OR4S2Q8NH73 311 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 C2orf50Q96LR7 162 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 TBX15Q96SF7 602 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 CELSR2Q9HCU4 2923 aa12.24□□□□□ -0.45
HMBOX1-210ENST00000523613 MPTX1A8MV57 137 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 ODF3BA8MYP8 253 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 RNASEK-C17orf49H0YIS7 233 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 S1PR2O95136 353 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 APOA2P02652 100 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 GAPDHP04406 335 aaKnown RBP12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 CEACAM3P40198 252 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 TAGLNQ01995 201 aaKnown RBP12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 PDZD9Q8IXQ8 264 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 RPEQ96AT9 228 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 RRNAD1Q96FB5 475 aaKnown RBP12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 OR10C1Q96KK4 312 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 SPIN2AQ99865 258 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 FOXC2Q99958 501 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 SPIN2BQ9BPZ2 258 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 NMES1Q9C002 83 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 SLC35D1Q9NTN3 355 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 GSKIPQ9P0R6 139 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 LEUTXA8MZ59 168 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 SMLR1H3BR10 107 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 TXNL1O43396 289 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 HPRT1P00492 218 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 RRASP10301 218 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 GATA3P23771 443 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 LGALS4P56470 323 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 DIAPH2-AS1Q14236 149 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 THOC7Q6I9Y2 204 aaKnown RBP12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 LHX4Q969G2 390 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 WDR89Q96FK6 387 aaPredicted RBP12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 NABP2Q9BQ15 211 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 PLEKHA2Q9HB19 425 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 COMMD9Q9P000 198 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
HMBOX1-210ENST00000523613 TACC2O95359 2948 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 C1QBP02746 253 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 EPHA1P21709 976 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 UBE2E1P51965 193 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 TPTE2P1Q5T6R2 138 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 DHRS7BQ6IAN0 325 aaPredicted RBP12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 MAPK1IP1LQ8NDC0 245 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 LSM10Q969L4 123 aaKnown RBP12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 HIF1ANQ9NWT6 349 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 AUP1Q9Y679 476 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 ABCA12Q86UK0 2595 aa12.22□□□□□ -0.45
HMBOX1-210ENST00000523613 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.45
HMBOX1-210ENST00000523613 POLQO75417 2590 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms