RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 DDB2Q92466 427 aa14□□□□□ -0.17
CLK4-211ENST00000522556 KCTD12Q96CX2 325 aaKnown RBP14□□□□□ -0.17
CLK4-211ENST00000522556 S100A16Q96FQ6 103 aaKnown RBP14□□□□□ -0.17
CLK4-211ENST00000522556 CLCC1Q96S66 551 aa14□□□□□ -0.17
CLK4-211ENST00000522556 OR51J1Q9H342 316 aa14□□□□□ -0.17
CLK4-211ENST00000522556 OR2W1Q9Y3N9 320 aa14□□□□□ -0.17
CLK4-211ENST00000522556 G3V4G9 280 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 KCNAB3O43448 404 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 HLA-DQB1P01920 261 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 APOA2P02652 100 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 RPLP1P05386 114 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 ELK1P19419 428 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 AADACP22760 399 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 DUTP33316 252 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 RPS16P62249 146 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 RPL23AP62750 156 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 RPL30P62888 115 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 SSBP2P81877 361 aaPredicted RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 LIN54Q6MZP7 749 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 PDPNQ86YL7 162 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 FAM103A1Q9BTL3 118 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 KIAA1456Q9P272 454 aa13.99□□□□□ -0.17
CLK4-211ENST00000522556 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
CLK4-211ENST00000522556 SLC25A17O43808 307 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 IGF1P05019 195 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 CTXN2P0C2S0 81 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 EGR2P11161 476 aaPredicted RBP13.98□□□□□ -0.17
CLK4-211ENST00000522556 LUMP51884 338 aaPredicted RBP13.98□□□□□ -0.17
CLK4-211ENST00000522556 ARPC4P59998 168 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 CX3CL1P78423 397 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 PLGLAQ15195 96 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 OR2B11Q5JQS5 317 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 C8orf86Q6ZUL3 223 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 CLVS1Q8IUQ0 354 aaPredicted RBP13.98□□□□□ -0.17
CLK4-211ENST00000522556 ZNF645Q8N7E2 425 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 DUX3Q96PT4 197 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 ANAPC10Q9UM13 185 aa13.98□□□□□ -0.17
CLK4-211ENST00000522556 SRRM4A7MD48 611 aaKnown RBP13.97□□□□□ -0.17
CLK4-211ENST00000522556 SOX15O60248 233 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 RBBP9O75884 186 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 CA2P00918 260 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 PF4V1P10720 104 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 FCGR2CP31995 323 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 THBS3P49746 956 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 RORCP51449 518 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 SLC35B1P78383 322 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 PJVKQ0ZLH3 352 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 EIF4EBP1Q13541 118 aaPredicted RBP13.97□□□□□ -0.17
CLK4-211ENST00000522556 ECSCRQ19T08 205 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 C19orf54Q5BKX5 351 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 KLHL30-AS1Q8NEE0 82 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 OR4F17Q8NGA8 305 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 CASTOR1Q8WTX7 329 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 FLYWCH2Q96CP2 140 aaKnown RBP13.97□□□□□ -0.17
CLK4-211ENST00000522556 OR4F4Q96R69 305 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 RBMX2Q9Y388 322 aaKnown RBP13.97□□□□□ -0.17
CLK4-211ENST00000522556 A3GALT2U3KPV4 340 aa13.97□□□□□ -0.17
CLK4-211ENST00000522556 NOTCH1P46531 2555 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 ARPC1BO15143 372 aaKnown RBP13.96□□□□□ -0.17
CLK4-211ENST00000522556 APOA1P02647 267 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 VDAC1P21796 283 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.17
CLK4-211ENST00000522556 DEFA6Q01524 100 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 MRGPRG-AS1Q2M3A8 158 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 DEFB136Q30KP8 78 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 RNASE12Q5GAN4 147 aaKnown RBP13.96□□□□□ -0.17
CLK4-211ENST00000522556 SNX29P2Q8IUI4 249 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 HARBI1Q96MB7 349 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 IFT46Q9NQC8 304 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 CCL28Q9NRJ3 127 aa13.96□□□□□ -0.17
CLK4-211ENST00000522556 MRPS7Q9Y2R9 242 aaKnown RBP13.96□□□□□ -0.17
CLK4-211ENST00000522556 WIPF1O43516 503 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 CRYZL1O95825 349 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 IGHG4P01861 327 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 CRYGBP07316 175 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 OR5H8P0DN80 308 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 BRWD1-AS2P59051 145 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 FXYD4P59646 89 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 TMEM177Q53S58 311 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 OXLD1Q5BKU9 147 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 TEX38Q6PEX7 206 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 OR5AP2Q8NGF4 316 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 SECTM1Q8WVN6 248 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 TSNAXQ99598 290 aaKnown RBP13.95□□□□□ -0.18
CLK4-211ENST00000522556 MIXL1Q9H2W2 232 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 NECAP2Q9NVZ3 263 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 TAS2R8Q9NYW2 309 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 ZNF580Q9UK33 172 aa13.95□□□□□ -0.18
CLK4-211ENST00000522556 TRAV41A0A0B4J266 112 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 NUDT19A8MXV4 375 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 TNFSF12O43508 249 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 SPDEFO95238 335 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 PPYP01298 95 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 PMP2P02689 132 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 ZNF182P17025 639 aaPredicted RBP13.94□□□□□ -0.18
CLK4-211ENST00000522556 PSMB8P28062 276 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 CBX5P45973 191 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 RFX2P48378 723 aa13.94□□□□□ -0.18
CLK4-211ENST00000522556 FOXE3Q13461 319 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms