RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MFNGO00587 321 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 APOA2P02652 100 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 OR8U9P0C7N5 309 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 GADD45AP24522 165 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 TMEM267Q0VDI3 215 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-209ENST00000522243 LFNGQ8NES3 379 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 MS4A10Q96PG2 267 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 OR2D2Q9H210 308 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 SLC35D1Q9NTN3 355 aa16.04■□□□□ 0.16
SDCBP-209ENST00000522243 SLC25A17O43808 307 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 IGHV3-11P01762 117 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 HIST1H1DP16402 221 aaKnown RBP16.03■□□□□ 0.16
SDCBP-209ENST00000522243 RAB6AP20340 208 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 SERPINB10P48595 397 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 SLURP1P55000 103 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 DCTN2Q13561 401 aaKnown RBP16.03■□□□□ 0.16
SDCBP-209ENST00000522243 ARFRP1Q13795 201 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 ACTBL2Q562R1 376 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 ZNF562Q6V9R5 426 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 NR2C2APQ86WQ0 139 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 PDPNQ86YL7 162 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 TCTEX1D1Q8N7M0 179 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 OR10J5Q8NHC4 309 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 FLYWCH2Q96CP2 140 aaKnown RBP16.03■□□□□ 0.16
SDCBP-209ENST00000522243 CABLES2Q9BTV7 478 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 TOLLIPQ9H0E2 274 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 SDHAF2Q9NX18 166 aa16.03■□□□□ 0.16
SDCBP-209ENST00000522243 OVOL1O14753 267 aa16.02■□□□□ 0.16
SDCBP-209ENST00000522243 GABARAPL2P60520 117 aa16.02■□□□□ 0.16
SDCBP-209ENST00000522243 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.02■□□□□ 0.16
SDCBP-209ENST00000522243 GRPEL2Q8TAA5 225 aa16.02■□□□□ 0.16
SDCBP-209ENST00000522243 DLX4Q92988 240 aaPredicted RBP16.02■□□□□ 0.16
SDCBP-209ENST00000522243 C5orf30Q96GV9 206 aa16.02■□□□□ 0.16
SDCBP-209ENST00000522243 ATG5Q9H1Y0 275 aa16.02■□□□□ 0.16
SDCBP-209ENST00000522243 ELF5Q9UKW6 265 aaPredicted RBP16.02■□□□□ 0.16
SDCBP-209ENST00000522243 LSM4Q9Y4Z0 139 aaKnown RBP16.02■□□□□ 0.16
SDCBP-209ENST00000522243 IGHV4OR15-8A0A075B7B6 117 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 A0A087WW49 117 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 TRBV6-7A0A0A0MS04 114 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 METTL21EPA6NDL7 271 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 LINC01619G3V211 115 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 ARPC1BO15143 372 aaKnown RBP16.01■□□□□ 0.15
SDCBP-209ENST00000522243 SPDEFO95238 335 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 ATP6V1G2O95670 118 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 LY86O95711 162 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 PSMB9P28065 219 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 TPPP2P59282 170 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 FXYD3Q14802 87 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 AKIRIN2Q53H80 203 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 ARPC1AQ92747 370 aa16.01■□□□□ 0.15
SDCBP-209ENST00000522243 ZNF256Q9Y2P7 627 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-209ENST00000522243 RBM7Q9Y580 266 aaKnown RBP16.01■□□□□ 0.15
SDCBP-209ENST00000522243 IGKV1D-8A0A087WSZ0 117 aa16■□□□□ 0.15
SDCBP-209ENST00000522243 LGALS1P09382 135 aaKnown RBP16■□□□□ 0.15
SDCBP-209ENST00000522243 TALDO1P37837 337 aa16■□□□□ 0.15
SDCBP-209ENST00000522243 UBE2UQ5VVX9 321 aa16■□□□□ 0.15
SDCBP-209ENST00000522243 SPARTQ8N0X7 666 aa16■□□□□ 0.15
SDCBP-209ENST00000522243 BVESQ8NE79 360 aa16■□□□□ 0.15
SDCBP-209ENST00000522243 GINS4Q9BRT9 223 aa16■□□□□ 0.15
SDCBP-209ENST00000522243 J3QRK9 145 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 MRPS14O60783 128 aaKnown RBP15.99■□□□□ 0.15
SDCBP-209ENST00000522243 IGLV2-23P01705 113 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 GALP22466 123 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 PJVKQ0ZLH3 352 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 PYHIN1Q6K0P9 492 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 HARBI1Q96MB7 349 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 ZNF355PQ9NSJ1 428 aa15.99■□□□□ 0.15
SDCBP-209ENST00000522243 TXNL4BQ9NX01 149 aaKnown RBP15.99■□□□□ 0.15
SDCBP-209ENST00000522243 SAP30O75446 220 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 CNIH1O95406 144 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 TRGV3P03979 118 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 CD40LGP29965 261 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 INSL3P51460 131 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 SSBP2P81877 361 aaPredicted RBP15.98■□□□□ 0.15
SDCBP-209ENST00000522243 OR5T1Q8NG75 326 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 ASCL2Q99929 193 aa15.98■□□□□ 0.15
SDCBP-209ENST00000522243 SHOXO15266 292 aa15.97■□□□□ 0.15
SDCBP-209ENST00000522243 HSPB1P04792 205 aaKnown RBP15.97■□□□□ 0.15
SDCBP-209ENST00000522243 CRYGBP07316 175 aa15.97■□□□□ 0.15
SDCBP-209ENST00000522243 CDNFQ49AH0 187 aa15.97■□□□□ 0.15
SDCBP-209ENST00000522243 RHOVQ96L33 236 aa15.97■□□□□ 0.15
SDCBP-209ENST00000522243 SRRM4A7MD48 611 aaKnown RBP15.96■□□□□ 0.15
SDCBP-209ENST00000522243 NOTOA8MTQ0 251 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 FGF9P31371 208 aaPredicted RBP15.96■□□□□ 0.15
SDCBP-209ENST00000522243 LGALS7P47929 136 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 ZNF429Q86V71 674 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 H1FOOQ8IZA3 346 aaPredicted RBP15.96■□□□□ 0.15
SDCBP-209ENST00000522243 ST6GALNAC5Q9BVH7 336 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 SLA2Q9H6Q3 261 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 DAPK2Q9UIK4 370 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 STUB1Q9UNE7 303 aa15.96■□□□□ 0.15
SDCBP-209ENST00000522243 DIRAS3O95661 229 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 CBX3Q13185 183 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 SRSF7Q16629 238 aaKnown RBP eCLIP15.95■□□□□ 0.14
SDCBP-209ENST00000522243 RTL8BQ17RB0 113 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 TMEM177Q53S58 311 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 POC5Q8NA72 575 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 OR51E2Q9H255 320 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 Q9H521 79 aa15.95■□□□□ 0.14
SDCBP-209ENST00000522243 SSR3Q9UNL2 185 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms