RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TRBV6-7A0A0A0MS04 114 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 NPIPB7O75200 414 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 TIAF1O95411 115 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 ZNF596Q8TC21 504 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 RND1Q92730 232 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 RARRES2Q99969 163 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 RAB1BQ9H0U4 201 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 GSX1Q9H4S2 264 aaPredicted RBP11.85□□□□□ -0.51
SYNPO-205ENST00000522122 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 CA5BP1Q8WTZ4 195 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 RBKSQ9H477 322 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 ESPL1Q14674 2120 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 H0YIZ8 118 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 BMPR1BO00238 502 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 GNG7O60262 68 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 STARD6P59095 220 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 P2RY6Q15077 328 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 ASPHD2Q6ICH7 369 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 M0QZ24 198 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 ACAA1P09110 424 aaPredicted RBP11.84□□□□□ -0.51
SYNPO-205ENST00000522122 HIST1H1EP10412 219 aaKnown RBP11.84□□□□□ -0.51
SYNPO-205ENST00000522122 FOLR2P14207 255 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 OR8G5Q8NG78 346 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 CYTL1Q9NRR1 136 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 CXorf65A6NEN9 183 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 M0QZK8 103 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
SYNPO-205ENST00000522122 OR4A8P0C604 315 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 ACP1P24666 158 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 ZNF818PQ6ZRF7 136 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 SHISA5Q8N114 240 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 FAM131CQ96AQ9 280 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 MEGF10Q96KG7 1140 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 SMPD2O60906 423 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 DNM1P46Q6ZS02 220 aa11.84□□□□□ -0.51
SYNPO-205ENST00000522122 CCL1P22362 96 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 RTN4RQ9BZR6 473 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 A0A1W2PRD5 423 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 A0A1W2PRF3 423 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 A0A1W2PRM7 423 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 C16orf97H3BN30 126 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 ASCL5Q7RTU5 278 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 TUBA4BQ9H853 241 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 OR2D3Q8NGH3 330 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 OR2V2Q96R30 315 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 DMRT1Q9Y5R6 373 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 MDC1Q14676 2089 aaKnown RBP11.83□□□□□ -0.52
SYNPO-205ENST00000522122 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 TCAPO15273 167 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
SYNPO-205ENST00000522122 WNT5AP41221 380 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 TNFRSF9Q07011 255 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 IZUMO4Q1ZYL8 232 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 LSM10Q969L4 123 aaKnown RBP11.83□□□□□ -0.52
SYNPO-205ENST00000522122 TP53RKQ96S44 253 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 PCGF1Q9BSM1 259 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 PILRBQ9UKJ0 227 aa11.83□□□□□ -0.52
SYNPO-205ENST00000522122 SPTBN2O15020 2390 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 SPAARA0A1B0GVQ0 90 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 K7N7A8 449 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 RIGQ13278 110 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 WDFY1Q8IWB7 410 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 VN1R17PQ8TDU5 208 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 WASHC3Q9Y3C0 194 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 ARHGEF17Q96PE2 2063 aaPredicted RBP11.82□□□□□ -0.52
SYNPO-205ENST00000522122 ISLRO14498 428 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 IGLV3-19P01714 112 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 SLC25A53Q5H9E4 307 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 GALNT14Q96FL9 552 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 DDA1Q9BW61 102 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 SLC25A10Q9UBX3 287 aaPredicted RBP11.82□□□□□ -0.52
SYNPO-205ENST00000522122 APCSP02743 223 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 CDX1P47902 265 aaPredicted RBP11.82□□□□□ -0.52
SYNPO-205ENST00000522122 REG1BP48304 166 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 CCL8P80075 99 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 ZNF441Q8N8Z8 693 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 TBX15Q96SF7 602 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 MFAP2P55001 183 aa11.82□□□□□ -0.52
SYNPO-205ENST00000522122 PLXND1Q9Y4D7 1925 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 PAXXQ9BUH6 204 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 AKAP6Q13023 2319 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 BRS3P32247 399 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 OR8B3Q8NGG8 313 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 OR8B2Q96RD0 313 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 CISD1Q9NZ45 108 aaKnown RBP11.81□□□□□ -0.52
SYNPO-205ENST00000522122 CHCHD2Q9Y6H1 151 aaPredicted RBP11.81□□□□□ -0.52
SYNPO-205ENST00000522122 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 ODAMA1E959 279 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 CEBPDP49716 269 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms