RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RPEQ96AT9 228 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 ADTRPQ96IZ2 230 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 MRPL20Q9BYC9 149 aaKnown RBP17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 DPM3Q9P2X0 92 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 PRELID3BQ9Y3B1 194 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 PDZD2O15018 2839 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 A0A0B4J2A0 478 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 CENPVL3A0A0U1RRI6 287 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 LEUTXA8MZ59 168 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 UCP1P25874 307 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 SRPXP78539 464 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 LHFPL4Q7Z7J7 247 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 ZNF695Q8IW36 515 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 ZNF383Q8NA42 475 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 MGAT4CQ9UBM8 478 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 SHPKQ9UHJ6 478 aa17.33■□□□□ 0.37
R3HCC1-208ENST00000522012 IGHV3OR16-10A0A075B7F0 116 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 A8MV72 311 aaPredicted RBP17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 LY6LH3BQJ8 138 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 J3QLI3 93 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 GOSR2O14653 212 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 RAMP3O60896 148 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 FCGR3BO75015 233 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 GAPDHP04406 335 aaKnown RBP17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 CEACAM3P40198 252 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 LPAR6P43657 344 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 ZNF816Q0VGE8 651 aaPredicted RBP17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 C2orf68Q2NKX9 166 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 TMEM268Q5VZI3 342 aa17.32■□□□□ 0.36
R3HCC1-208ENST00000522012 BRWD1-AS2P59051 145 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 ZNF585BQ52M93 769 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 LDLRAD2Q5SZI1 272 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 TPTE2P1Q5T6R2 138 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 TCTEX1D1Q8N7M0 179 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 OR11H7Q8NGC8 314 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 LHFPL5Q8TAF8 219 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 DDB2Q92466 427 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 TMEM56Q96MV1 263 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 NABP2Q9BQ15 211 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 HILPDAQ9Y5L2 63 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 TMEM56-RWDD3S4R434 201 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 PRRC2AP48634 2157 aaKnown RBP17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 TRAV40A0A0B4J280 105 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 CDS2O95674 445 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 HOXB5P09067 269 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 SULT1A3P0DMM9 295 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 SULT1A4P0DMN0 295 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 EPHA1P21709 976 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 KIR2DS2P43631 304 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 MINOS1Q5TGZ0 78 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 SELENOHQ8IZQ5 122 aaKnown RBP17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 CD300LFQ8TDQ1 290 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 MINOS1-NBL1R4GNA1 71 aa17.31■□□□□ 0.36
R3HCC1-208ENST00000522012 IGHV1-69DA0A0B4J2H0 117 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 DBX1A6NMT0 343 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 CCSO14618 274 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 NPFFO15130 113 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 ADAP1O75689 374 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 AVPP01185 164 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 IGHV1-69P01742 117 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 TRAPPC2P0DI81 140 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 TRAPPC2BP0DI82 140 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 CXCL3P19876 107 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 GPR157Q5UAW9 335 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 LYZL2Q7Z4W2 148 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 MOB3BQ86TA1 216 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 LRTM2Q8N967 370 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 CHAC2Q8WUX2 184 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 C18orf12Q96KH6 178 aa17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 TBL2Q9Y4P3 447 aaKnown RBP17.3■□□□□ 0.36
R3HCC1-208ENST00000522012 IGHV1-3A0A0C4DH29 117 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 FAM25EA8MYX2 175 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 TXNL1O43396 289 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 PFDN1O60925 122 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 SIX6O95475 246 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 APOA2P02652 100 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 MIDNQ504T8 468 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 SLC35G3Q8N808 338 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 RBPMSQ93062 196 aaKnown RBP17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 RAB18Q9NP72 206 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 FAM212BQ9NTI7 297 aaPredicted RBP17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 SLC35D1Q9NTN3 355 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 MED13LQ71F56 2210 aa17.29■□□□□ 0.36
R3HCC1-208ENST00000522012 C13orf42A0A1B0GVH6 325 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 H0YJW9 148 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 H7C2Y5 167 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 S1PR2O95136 353 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 IGHV4-38-2P0DP08 117 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 SAA4P35542 130 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 CD83Q01151 205 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 SSX2Q16385 188 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 RTL8BQ17RB0 113 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 RUSC1-AS1Q66K80 236 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 OR5AN1Q8NGI8 311 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 OR4S2Q8NH73 311 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 C17orf50Q8WW18 174 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 IL22RA2Q969J5 263 aa17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 RBMXL1Q96E39 390 aaKnown RBP17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 TEP1Q99973 2627 aaKnown RBP17.28■□□□□ 0.36
R3HCC1-208ENST00000522012 IGHV3-72A0A0B4J1Y9 119 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms