RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CACNA1CQ13936 2221 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ANKHD1Q8IWZ3 2542 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 LRRK2Q5S007 2527 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PRR14LQ5THK1 2151 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 RELNP78509 3460 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 AGRNO00468 2067 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 A0A087WZ39 114 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 A0A0A6YYD4 124 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 KIR2DS1A0A191URI9 304 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SMIM31A0A1B0GVY4 71 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 A0A1B0GW55 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 FUOMA2VDF0 154 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 MCRIP1C9JLW8 97 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 J3QLI3 93 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF701M0R085 212 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SIRPB1O00241 398 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 GEMIN2O14893 280 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PHF1O43189 567 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ENSAO43768 121 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 CD5LO43866 347 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 NOL3O60936 208 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PDCD6O75340 191 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SAP30O75446 220 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 FCN3O75636 299 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 CRTAPO75718 401 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 OR7C1O76099 320 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 LY6G6DO95868 133 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 OR2H2O95918 312 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PAHP00439 452 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TGFAP01135 160 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 GLAP06280 429 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 MSMBP08118 114 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L2P0CJ85 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L3P0CJ86 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L4P0CJ87 422 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L5P0CJ88 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L6P0CJ89 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L7P0CJ90 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF44P15621 663 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 MGMTP16455 207 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 C4BPBP20851 252 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 FUT3P21217 361 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 GABRR1P24046 479 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ERP29P30040 261 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 BLVRBP30043 206 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TGFBR1P36897 503 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 KCNJ3P48549 501 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SERPINB10P48595 397 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 CEBPDP49716 269 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 RORCP51449 518 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 CLDN12P56749 244 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 VBP1P61758 197 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 GNB2P62879 340 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 RPS27AP62979 156 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PAX2Q02962 417 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 MEF2CQ06413 473 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 CBX3Q13185 183 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DYNC1I2Q13409 638 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 UNC119Q13432 240 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 GRK1Q15835 563 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TAF9Q16594 264 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PIGYQ3MUY2 71 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 IDNKQ5T6J7 187 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 OR10K2Q6IF99 312 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SFXN4Q6P4A7 337 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4L9Q6RFH8 374 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SIGLEC15Q6ZMC9 328 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 C17orf107Q6ZR85 190 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 GDPD3Q7L5L3 318 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 LINC00596Q86U02 117 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 BIVMQ86UB2 503 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ABHD12Q8N2K0 398 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 FAM216BQ8N7L0 139 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SUMF2Q8NBJ7 301 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ZNRF1Q8ND25 227 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 LY6G5BQ8NDX9 201 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TMEM104Q8NE00 496 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TMEM185AQ8NFB2 350 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 OR4S1Q8NGB4 309 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 C8orf46Q8TAG6 207 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 RAB2BQ8WUD1 216 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ACOT12Q8WYK0 555 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 FAM46BQ96A09 425 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 PTX4Q96A99 478 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SLC25A46Q96AG3 418 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TMEM186Q96B77 213 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 ISOC1Q96CN7 298 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DGCR14Q96DF8 476 aaKnown RBP2.5□□□□□ -2.01
VPS13B-209ENST00000521559 NEDD4LQ96PU5 975 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 TMEM59Q9BXS4 323 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SELENOIQ9C0D9 397 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 LPAR5Q9H1C0 372 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DCSTAMPQ9H295 470 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 NCOR1P1Q9H4R4 102 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 SPACA1Q9HBV2 294 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 LPAR2Q9HBW0 351 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 MMP26Q9NRE1 261 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 DUX4Q9UBX2 424 aa2.5□□□□□ -2.01
VPS13B-209ENST00000521559 KLK11Q9UBX7 282 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms