RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TRPC5OSA6NMA1 111 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 SRRM4A7MD48 611 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 FXYD1O00168 92 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 CLEC3BP05452 202 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 EPHA2P29317 976 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 STX3Q13277 289 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 AGKQ53H12 422 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 C10orf55Q5SWW7 151 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 DRAXINQ8NBI3 349 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 OR10AC1Q8NH08 325 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 MRPS24Q96EL2 167 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 DPCDQ9BVM2 203 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 WASHC3Q9Y3C0 194 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 UFC1Q9Y3C8 167 aa4.52□□□□□ -1.69
CTNNA1-216ENST00000519489 IGHV3-49A0A0A0MS15 119 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 TMEM30CPA0ZSE6 113 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 LRCOL1A6NCL2 159 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 OR5H14A6NHG9 310 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF705FA8MVS1 300 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 H7C2Y5 167 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SNX3O60493 162 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 CCDC22O60826 627 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SNNO75324 88 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 GMNNO75496 209 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 RBBP9O75884 186 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SPDEFO95238 335 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF705DP0CH99 300 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF705BP0CI00 300 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF3P17036 446 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 RCC1P18754 421 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ATF1P18846 271 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 MAP2K4P45985 399 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SOX2P48431 317 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ROM1Q03395 351 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SLC25A30Q5SVS4 291 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF529Q6P280 563 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF705AQ6ZN79 300 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SLC15A3Q8IY34 581 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 PRSS35Q8N3Z0 413 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 TTC9CQ8N5M4 171 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF383Q8NA42 475 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SLC7A6OSQ96CW6 309 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 C7orf34Q96L11 122 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 RNF5Q99942 180 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 APOL4Q9BPW4 351 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SULT4A1Q9BR01 284 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 OR52A1Q9UKL2 312 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 GTF2A1LQ9UNN4 478 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
CTNNA1-216ENST00000519489 HMX3A6NHT5 357 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 BIRC5O15392 142 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 IGLV2-8P01709 118 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 MYOD1P15172 320 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 PSMB6P28072 239 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 BLVRAP53004 296 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 NANOS3P60323 173 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 RPS7P62081 194 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 LIPEQ05469 1076 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 ZSCAN26Q16670 478 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 IFI44LQ53G44 452 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 BCL2L15Q5TBC7 163 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 DMKNQ6E0U4 476 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 STHQ8IWL8 128 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 OR10K1Q8NGX5 313 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 UBLCP1Q8WVY7 318 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 SRSF12Q8WXF0 261 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 TM2D1Q9BX74 207 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 OR51V1Q9H2C8 321 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 OR2S2Q9NQN1 319 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 IL20Q9NYY1 176 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 XCL2Q9UBD3 114 aa4.5□□□□□ -1.69
CTNNA1-216ENST00000519489 E7EUB6 86 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 CHEK1O14757 476 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 GATBO75879 557 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 SPP1P10451 314 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 IGFBP3P17936 291 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 GPR183P32249 361 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 KCNJ3P48549 501 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 TSPAN31Q12999 210 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 LINC01620Q4KN68 170 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 SYT6Q5T7P8 510 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 ELP2Q6IA86 826 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 DEGS2Q6QHC5 323 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 EPGNQ6UW88 154 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 CEACAM19Q7Z692 300 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF679Q8IYX0 411 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 SAXO1Q8IYX7 474 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 OR4K15Q8NH41 348 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 ABHD14BQ96IU4 210 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 NEU1Q99519 415 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 TSNAXQ99598 290 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 PHB2Q99623 299 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 EBF4Q9BQW3 602 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 TSSK6Q9BXA6 273 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 DAZ1Q9NQZ3 744 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 ARMC1Q9NVT9 282 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms