RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 CLDN14O95500 239 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 THBS3P49746 956 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 RND3P61587 244 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 GNB1P62873 340 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 NHLH1Q02575 133 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 BSXQ3C1V8 233 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 STUMQ69YW2 141 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 DPPA3Q6W0C5 159 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 NEIL1Q96FI4 390 aaPredicted RBP9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 C18orf12Q96KH6 178 aa9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 CARHSP1Q9Y2V2 147 aaKnown RBP9.57□□□□□ -0.88
PCDHGB4-201ENST00000519479 ZNF320A2RRD8 509 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 CNIH1O95406 144 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 BCL2P10415 239 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 IGHV1-2P23083 117 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 PCP4P48539 62 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 TIGITQ495A1 244 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 FAM103A1Q9BTL3 118 aaKnown RBP9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 VAMP8Q9BV40 100 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 MPV17P39210 176 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 SRSF4Q08170 494 aaKnown RBP9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 TCF15Q12870 199 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 DAZAP1Q96EP5 407 aaKnown RBP9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 RHOVQ96L33 236 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 RBKSQ9H477 322 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 PCDH15Q96QU1 1955 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 KIAA2026Q5HYC2 2103 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 XKRY2A2RUG3 117 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 DNASE2O00115 360 aaPredicted RBP9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 DEFA4P12838 97 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 NTF3P20783 257 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 CHRNA7P36544 502 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 PMS2P11Q13670 270 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 TMEM42Q69YG0 159 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 SIGLECL1Q8N7X8 197 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 SSMEM1Q8WWF3 244 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 LSM10Q969L4 123 aaKnown RBP9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 ADTRPQ96IZ2 230 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 GAL3ST2Q9H3Q3 398 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 SLC35D1Q9NTN3 355 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 CUL9Q8IWT3 2517 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 SPTAN1Q13813 2472 aaKnown RBP9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 A0A1B0GV90 55 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 H0YL77 283 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 SSTR5P35346 364 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 CCL8P80075 99 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 HES1Q14469 280 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 ITLN1Q8WWA0 313 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
PCDHGB4-201ENST00000519479 ODAMA1E959 279 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 PAGE4O60829 102 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 GALR1P47211 349 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 KRTDAPP60985 99 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 TNFRSF9Q07011 255 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 RTP5Q14D33 572 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 C1orf174Q8IYL3 243 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 TAF15Q92804 592 aaKnown RBP eCLIP9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 TMEM56Q96MV1 263 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 TMEM56-RWDD3S4R434 201 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 CTXND1A0A1B0GTU2 59 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 WIPF3A6NGB9 483 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 S1PR2O95136 353 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 CECR9P0C854 216 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 HNRNPA3P51991 378 aaKnown RBP9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 ASCL5Q7RTU5 278 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 INTS1Q8N201 2190 aaKnown RBP9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 TRAV24A0A0B4J272 114 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 C11orf94C9JXX5 98 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 DHRS7BQ6IAN0 325 aaPredicted RBP9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 RND1Q92730 232 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 SNX22Q96L94 193 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 MS4A10Q96PG2 267 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 SLX1AQ9BQ83 275 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 GSN-AS1Q9NRJ2 163 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 AKAP6Q13023 2319 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 TRAV38-1A0A0B4J264 116 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 B4DEV8 164 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 WNT5AP41221 380 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 PLPPR1Q8TBJ4 325 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 SPSB4Q96A44 273 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 ZDHHC11Q9H8X9 412 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 MANBALQ9NQG1 85 aa9.55□□□□□ -0.88
PCDHGB4-201ENST00000519479 POLEQ07864 2286 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 HPRT1P00492 218 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 FBP1P09467 338 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 KLRB1Q12918 225 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 RSPO1Q2MKA7 263 aaPredicted RBP9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 C1orf185Q5T7R7 199 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 SAP30LQ9HAJ7 183 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
PCDHGB4-201ENST00000519479 SPRR3Q9UBC9 169 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms