RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 LIMS3P0CW19 117 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 LIMS4P0CW20 117 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 OR10J1P30954 320 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 CCR7P32248 378 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 C1DQ13901 141 aaKnown RBP0.06□□□□□ -2.4
PCM1-208ENST00000518877 DEFB115Q30KQ5 88 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 FAM173BQ6P4H8 233 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 FAM19A2Q8N3H0 131 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 TMEM56Q96MV1 263 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 NKX6-2Q9C056 277 aaPredicted RBP0.06□□□□□ -2.4
PCM1-208ENST00000518877 METTL8Q9H825 291 aaKnown RBP0.06□□□□□ -2.4
PCM1-208ENST00000518877 MED9Q9NWA0 146 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 TAAR3PQ9P1P4 343 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 ZFC3H1O60293 1989 aaKnown RBP0.06□□□□□ -2.4
PCM1-208ENST00000518877 HEATR5AQ86XA9 2040 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 REREQ9P2R6 1566 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 IGHV1-18A0A0C4DH31 117 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 TXNDC9O14530 226 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 CRXO43186 299 aaPredicted RBP0.05□□□□□ -2.4
PCM1-208ENST00000518877 SGCEO43556 437 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 HMMRO75330 724 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 PSMG1O95456 288 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 TPM2P07951 284 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 UCHL1P09936 223 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 LCN1P31025 176 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 TMEM267Q0VDI3 215 aaPredicted RBP0.05□□□□□ -2.4
PCM1-208ENST00000518877 XRCC4Q13426 336 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 USF2Q15853 346 aaPredicted RBP0.05□□□□□ -2.4
PCM1-208ENST00000518877 LRRC75BQ2VPJ9 315 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 ARHGAP11BQ3KRB8 267 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 TTC33Q6PID6 262 aaPredicted RBP0.05□□□□□ -2.4
PCM1-208ENST00000518877 ATP5L2Q7Z4Y8 100 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 MRPL52Q86TS9 123 aaKnown RBP0.05□□□□□ -2.4
PCM1-208ENST00000518877 OR51H1Q8NH63 302 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 IFT81Q8WYA0 676 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 CST9LQ9H4G1 147 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 POLR3HQ9Y535 204 aaPredicted RBP0.05□□□□□ -2.4
PCM1-208ENST00000518877 GREB1Q4ZG55 1949 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 EML5Q05BV3 1969 aa0.05□□□□□ -2.4
PCM1-208ENST00000518877 GRIN2BQ13224 1484 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 SIPA1L1O43166 1804 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 LAMA4Q16363 1823 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 A0A0D9SEW6 157 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 RAB19A4D1S5 217 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 TRAPPC13A5PLN9 417 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 HMSDA8MTL9 139 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 CYTH3O43739 400 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 MPZL2O60487 215 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 ADAP1O75689 374 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 ARL6IP5O75915 188 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 SNAP29O95721 258 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 CST4P01036 141 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 GP1BAP07359 652 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 IL9P15248 144 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 CA7P43166 264 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 CTBP2P56545 445 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 CARD18P57730 90 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 FLOT2Q14254 428 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 LRRC34Q8IZ02 419 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 MBD3L1Q8WWY6 194 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 CCDC127Q96BQ5 260 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 IMMP2LQ96T52 175 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 DOHHQ9BU89 302 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 REG4Q9BYZ8 158 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 NRBP2Q9NSY0 501 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 MS4A12Q9NXJ0 267 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 SNX10Q9Y5X0 201 aa0.04□□□□□ -2.4
PCM1-208ENST00000518877 A0A087WUU8 490 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 IBA57-AS1B1ANH7 110 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 H3BT86 120 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 M0R381 172 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 GSTZ1O43708 216 aaPredicted RBP0.03□□□□□ -2.4
PCM1-208ENST00000518877 NDUFB2O95178 105 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 LDOC1O95751 146 aaPredicted RBP0.03□□□□□ -2.4
PCM1-208ENST00000518877 NPYP01303 97 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 SERPINA7P05543 415 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 TFPTP0C1Z6 253 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 CCL2P13500 99 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 GABRA2P47869 451 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 LCN8Q6JVE9 175 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 LYZL1Q6UWQ5 148 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 ZNF705AQ6ZN79 300 aaPredicted RBP0.03□□□□□ -2.4
PCM1-208ENST00000518877 OR2D3Q8NGH3 330 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 ZNF675Q8TD23 568 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 TMEM239Q8WW34 195 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 NMNAT3Q96T66 252 aa0.03□□□□□ -2.4
PCM1-208ENST00000518877 TNRC6BQ9UPQ9 1833 aaKnown RBP0.03□□□□□ -2.4
PCM1-208ENST00000518877 FRAS1Q86XX4 4008 aa0.03□□□□□ -2.41
PCM1-208ENST00000518877 NAV3Q8IVL0 2385 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 TRAPPC2LH3BP13 241 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 KLRC4O43908 158 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 ORC5O43913 435 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 TNFAIP8O95379 198 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 NPPAP01160 153 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 LGALS1P09382 135 aaKnown RBP0.02□□□□□ -2.41
PCM1-208ENST00000518877 SLC35E2BP0CK96 405 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 RNASE3P12724 160 aaKnown RBP0.02□□□□□ -2.41
PCM1-208ENST00000518877 AGTR1P30556 359 aa0.02□□□□□ -2.41
PCM1-208ENST00000518877 RPL28P46779 137 aaKnown RBP0.02□□□□□ -2.41
PCM1-208ENST00000518877 ETV1P50549 477 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms