RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 EWSR1Q01844 656 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 GUCA2BQ16661 112 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 OR2G6Q5TZ20 316 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 C1orf146Q5VVC0 180 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 LGALS9CQ6DKI2 356 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 SLC16A13Q7RTY0 426 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 FAM223AQ8IWN6 122 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 FAM46BQ96A09 425 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 PTX4Q96A99 478 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 PGLYRP3Q96LB9 341 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 FAAP24Q9BTP7 215 aa9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 ZNF230Q9UIE0 474 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC9-204ENST00000518723 LOC102724200A0A096LPH7 203 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 TRBV6-6A0A0A6YYG2 114 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 A0A0J9YWU9 116 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 C2orf70A6NJV1 201 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 DEDDO75618 318 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 LALBAP00709 142 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 OR9G9P0C7N8 305 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 FOLR2P14207 255 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 ZBTB25P24278 435 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 DCKP27707 260 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 CEACAM6P40199 344 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 LINC00205P59089 165 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 EXOSC2Q13868 293 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 C6orf201Q7Z4U5 140 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 NKAIN3Q8N8D7 197 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 WDR89Q96FK6 387 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 SLC29A1Q99808 456 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 AKIP1Q9NQ31 210 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 OR1A1Q9P1Q5 309 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 TP53TG1Q9Y2A0 90 aa9.24□□□□□ -0.93
TRAPPC9-204ENST00000518723 DNAH6Q9C0G6 4158 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 TRBV9A0A0B4J1U6 114 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 LGALS9O00182 355 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 UBBP0CG47 229 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 RHOGP84095 191 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 MRGPRG-AS1Q2M3A8 158 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 FAM209BQ5JX69 171 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 APH1BQ8WW43 257 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 DERL3Q96Q80 235 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 RIMS4Q9H426 269 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 CHMP1AQ9HD42 196 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 SLC35D1Q9NTN3 355 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 ZNF221Q9UK13 617 aa9.23□□□□□ -0.93
TRAPPC9-204ENST00000518723 A0A1W2PPK0 400 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 MSGN1A6NI15 193 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 TUSC2O75896 110 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 HTR2CP28335 458 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 BMI1P35226 326 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 RPS27AP62979 156 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 HLA-DRB3P79483 266 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 ATP5G2Q06055 141 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 Q6ZWC4 215 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 KCNG3Q8TAE7 436 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 SETD6Q8TBK2 473 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 THRSPQ92748 146 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 HARBI1Q96MB7 349 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 PHB2Q99623 299 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 TM2D1Q9BX74 207 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 MGAT4AQ9UM21 535 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 DMRT1Q9Y5R6 373 aa9.22□□□□□ -0.93
TRAPPC9-204ENST00000518723 PKHD1P08F94 4074 aa9.21□□□□□ -0.93
TRAPPC9-204ENST00000518723 SRRM4A7MD48 611 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 M0R1X1 148 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 DYNC1I1O14576 645 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 APELAP0DMC3 54 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 EDN2P20800 178 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 ZNF45Q02386 682 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 TMEM177Q53S58 311 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 TMEM61Q8N0U2 210 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 CBR4Q8N4T8 237 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 NECAP1Q8NC96 275 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 ZNF485Q8NCK3 441 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 OR52B4Q8NGK2 314 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 TMEM59Q9BXS4 323 aa9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 DIMT1Q9UNQ2 313 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 EXOSC1Q9Y3B2 195 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-204ENST00000518723 LOC100130705A0A1B0GUX0 176 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 IRGMA1A4Y4 181 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 SPRY2O43597 315 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 GGCTO75223 188 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 WBP4O75554 376 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 MYL12AP19105 171 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 CBLN1P23435 193 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 TAGLNQ01995 201 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 SMN1Q16637 294 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 PRSS8Q16651 343 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 ANKRD55Q3KP44 614 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 ZNF57Q68EA5 555 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 OR10K2Q6IF99 312 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 GPHB5Q86YW7 130 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 ZFP41Q8N8Y5 198 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 TEX45Q8NA69 505 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 SRSF12Q8WXF0 261 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 PLEKHJ1Q9NW61 149 aa9.2□□□□□ -0.94
TRAPPC9-204ENST00000518723 CLEC2DQ9UHP7 191 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms