RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 SETD2Q9BYW2 2564 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-203ENST00000517921 ACANP16112 2415 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 A8MV72 311 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-203ENST00000517921 RNASEK-C17orf49H0YIS7 233 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 GOSR2O14653 212 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 TOR1AO14656 332 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 B3GALNT1O75752 331 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 TOX4O94842 621 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 PRRX1P54821 245 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 BRWD1-AS2P59051 145 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 SRPXP78539 464 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 ZNF585BQ52M93 769 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-203ENST00000517921 NCR3LG1Q68D85 454 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 LINC01356Q8N9X3 169 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 DRAXINQ8NBI3 349 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-203ENST00000517921 WFDC11Q8NEX6 87 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 OR5M8Q8NGP6 311 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 DDB2Q92466 427 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 TMEM186Q96B77 213 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 TMEM56Q96MV1 263 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 S1PR3Q99500 378 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 PCGF1Q9BSM1 259 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 HEXA-AS1Q9H8Q6 139 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 TMEM56-RWDD3S4R434 201 aa8.59□□□□□ -1.03
PABPC1-203ENST00000517921 TRAV20A0A0B4J274 112 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 BUB1B-PAK6H3BSN5 160 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 CCSO14618 274 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 PFDN1O60925 122 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 CDS2O95674 445 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 IGKV1-39P01597 117 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 IGKV1D-39P04432 117 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 ARG1P05089 322 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 IGHV4-31P0DP07 118 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 FOSL1P15407 271 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-203ENST00000517921 HLA-GP17693 338 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 IL3RAP26951 378 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 THBS3P49746 956 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 CD83Q01151 205 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 CD300CQ08708 224 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 DIAPH2-AS1Q14236 149 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 TMEM249Q2WGJ8 235 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 OR2B11Q5JQS5 317 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 LDLRAD2Q5SZI1 272 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 DCAF12L2Q5VW00 463 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 TMEM268Q5VZI3 342 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 SELENOHQ8IZQ5 122 aaKnown RBP8.58□□□□□ -1.04
PABPC1-203ENST00000517921 LGI3Q8N145 548 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 TCTEX1D1Q8N7M0 179 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 ZNF383Q8NA42 475 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
PABPC1-203ENST00000517921 IL22RA2Q969J5 263 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 ADTRPQ96IZ2 230 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 ST6GAL2Q96JF0 529 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 C18orf12Q96KH6 178 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 MRPL20Q9BYC9 149 aaKnown RBP8.58□□□□□ -1.04
PABPC1-203ENST00000517921 RAB18Q9NP72 206 aa8.58□□□□□ -1.04
PABPC1-203ENST00000517921 FAM212BQ9NTI7 297 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-203ENST00000517921 AMMECR1Q9Y4X0 333 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-203ENST00000517921 DUXBA0A1W2PPF3 345 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 RBFOX2O43251 390 aaKnown RBP eCLIP8.57□□□□□ -1.043e-11■■□□□ 11.8
PABPC1-203ENST00000517921 RAMP3O60896 148 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 FCGR3BO75015 233 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 ADAP1O75689 374 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 CCNKO75909 580 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 SIX6O95475 246 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 SERPINE2P07093 398 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 HOXB5P09067 269 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 CT45A6P0DMU7 189 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 CT45A5P0DMU8 189 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 CT45A7P0DMV0 189 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 REG1BP48304 166 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 H2BFSP57053 126 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 PDZD9Q8IXQ8 264 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 SPAG16Q8N0X2 631 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 SLC35G3Q8N808 338 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 LHX4Q969G2 390 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 NABP2Q9BQ15 211 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 ZNF436Q9C0F3 470 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-203ENST00000517921 RANGRFQ9HD47 186 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-203ENST00000517921 HIF1ANQ9NWT6 349 aa8.57□□□□□ -1.04
PABPC1-203ENST00000517921 A0A1W2PRD5 423 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 A0A1W2PRF3 423 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 A0A1W2PRM7 423 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 MPTX1A8MV57 137 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 OR2A4O95047 310 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 S1PR2O95136 353 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 GIPP09681 153 aaPredicted RBP8.56□□□□□ -1.04
PABPC1-203ENST00000517921 RPA2P15927 270 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 GATA3P23771 443 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 HTR1DP28221 377 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 KIR2DS2P43631 304 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 GZMKP49863 264 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 UBE2E1P51965 193 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 ZNF816Q0VGE8 651 aaPredicted RBP8.56□□□□□ -1.04
PABPC1-203ENST00000517921 TPTE2P1Q5T6R2 138 aa8.56□□□□□ -1.04
PABPC1-203ENST00000517921 GGNBP1Q5YKI7 109 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms