RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 MPC1Q9Y5U8 109 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 C5orf49A4QMS7 147 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCM1-204ENST00000517730 SS18L1O75177 396 aaPredicted RBP12.8□□□□□ -0.36
PCM1-204ENST00000517730 SERF1AO75920 110 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 TIMP3P35625 211 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 Q0VG73 95 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 DMRTA1Q5VZB9 504 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 ZNF497Q6ZNH5 498 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 VN1R17PQ8TDU5 208 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 WIPI2Q9Y4P8 454 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 EGR1P18146 543 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 LINC00310P59036 64 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 Q6P435 159 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 MYPOPQ86VE0 399 aaPredicted RBP12.8□□□□□ -0.36
PCM1-204ENST00000517730 RPS19BP1Q86WX3 136 aaKnown RBP12.8□□□□□ -0.36
PCM1-204ENST00000517730 PRR18Q8N4B5 295 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 ZNF114Q8NC26 417 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 DERL1Q9BUN8 251 aa12.8□□□□□ -0.36
PCM1-204ENST00000517730 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
PCM1-204ENST00000517730 A0A1W2PPV4 95 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 A0A1W2PR80 420 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 ODAMA1E959 279 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 CD33P20138 364 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 UBE2G2P60604 165 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 ZNF90Q03938 601 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 BATFQ16520 125 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 BAGE3Q86Y29 109 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 BAGE2Q86Y30 109 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 ZNF645Q8N7E2 425 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 CCDC74BQ96LY2 380 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 IL36BQ9NZH7 164 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 C2CD4DB7Z1M9 353 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 SIAH2O43255 324 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 ZG16O60844 167 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 COX6A1P12074 109 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 G6PCP35575 357 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 CDKN1AP38936 164 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 RAB7AP51149 207 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 ARF1P84077 181 aaKnown RBP12.79□□□□□ -0.36
PCM1-204ENST00000517730 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
PCM1-204ENST00000517730 TRBV9A0A0B4J1U6 114 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 MMP23AO75900 390 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 MLF1P58340 268 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 CATR1Q13166 79 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 TRIP6Q15654 476 aaKnown RBP12.78□□□□□ -0.36
PCM1-204ENST00000517730 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 ARL6IP6Q8N6S5 226 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 RNF2Q99496 336 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
PCM1-204ENST00000517730 AKIRIN1Q9H9L7 192 aaPredicted RBP12.78□□□□□ -0.36
PCM1-204ENST00000517730 MSL2Q9HCI7 577 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 PRDM6Q9NQX0 595 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
PCM1-204ENST00000517730 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 RAB29O14966 203 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 CBLN1P23435 193 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 ZNF586Q9NXT0 402 aa12.78□□□□□ -0.36
PCM1-204ENST00000517730 TRAV39A0A0B4J263 110 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 J3QT63 122 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 MPDU1O75352 247 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.37
PCM1-204ENST00000517730 CCL2P13500 99 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 COMPP49747 757 aaPredicted RBP12.77□□□□□ -0.37
PCM1-204ENST00000517730 FBXW9Q5XUX1 488 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 SLC23A3Q6PIS1 610 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 TCTEX1D1Q8N7M0 179 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 SIGLECL1Q8N7X8 197 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 SLC35E1Q96K37 410 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 RAMP3O60896 148 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 CLDN14O95500 239 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 P04436 131 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 Q8N7P7 452 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 ABHD3Q8WU67 409 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 SLC45A2Q9UMX9 530 aa12.77□□□□□ -0.37
PCM1-204ENST00000517730 IGHV3-9P01782 118 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 DEFA4P12838 97 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 RAC2P15153 192 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 CHRNB4P30926 498 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 HLA-BQ31612 363 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 Q8IYB0 196 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 OCC1Q8TAD7 63 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 DNAJC4Q9NNZ3 241 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 TRAV38-1A0A0B4J264 116 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 A0A1W2PQM1 296 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 A8MXE2 369 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 CXorf1O96002 111 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 CD1BP29016 333 aa12.76□□□□□ -0.37
PCM1-204ENST00000517730 RPL19P84098 196 aaKnown RBP12.76□□□□□ -0.37
PCM1-204ENST00000517730 ZNF816Q0VGE8 651 aaPredicted RBP12.76□□□□□ -0.37
PCM1-204ENST00000517730 SMRP1Q8NCR6 262 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms