RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 B9D2Q9BPU9 175 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 ATG5Q9H1Y0 275 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 CNIH1O95406 144 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 DIRAS3O95661 229 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 ATP6V1G2O95670 118 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 CA2P00918 260 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 IGKV1-16P04430 117 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 HIST1H1DP16402 221 aaKnown RBP10.62□□□□□ -0.71
TCOF1-215ENST00000515516 GNB1P62873 340 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 NDPQ00604 133 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 TAGLNQ01995 201 aaKnown RBP10.62□□□□□ -0.71
TCOF1-215ENST00000515516 AKIRIN2Q53H80 203 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 IGSF11Q5DX21 431 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 OR2D2Q9H210 308 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF355PQ9NSJ1 428 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 GAB2Q9UQC2 676 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 KCNK7Q9Y2U2 307 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 FBXO7Q9Y3I1 522 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 NUBP2Q9Y5Y2 271 aa10.62□□□□□ -0.71
TCOF1-215ENST00000515516 TRBV6-7A0A0A0MS04 114 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 LINC01619G3V211 115 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 RAB27BO00194 218 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 MFNGO00587 321 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 OVOL1O14753 267 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 SLC25A17O43808 307 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 PROP1O75360 226 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 LY86O95711 162 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 LGALS7P47929 136 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 TPPP2P59282 170 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 FXYD3Q14802 87 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 SRSF7Q16629 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
TCOF1-215ENST00000515516 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 UBE2UQ5VVX9 321 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 LFNGQ8NES3 379 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 GRPEL2Q8TAA5 225 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 CASTOR1Q8WTX7 329 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 MAFIPQ8WZ33 124 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 PRR25Q96S07 402 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 FAM103A1Q9BTL3 118 aaKnown RBP10.61□□□□□ -0.71
TCOF1-215ENST00000515516 CABLES2Q9BTV7 478 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 YTHDF1Q9BYJ9 559 aaKnown RBP10.61□□□□□ -0.71
TCOF1-215ENST00000515516 TOLLIPQ9H0E2 274 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 SDHAF2Q9NX18 166 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF230Q9UIE0 474 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-215ENST00000515516 SCOCQ9UIL1 159 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 SSR3Q9UNL2 185 aa10.61□□□□□ -0.71
TCOF1-215ENST00000515516 A0A0B4J203 849 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 SHISA3A0PJX4 238 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 NOTOA8MTQ0 251 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 SHOXO15266 292 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 SOX15O60248 233 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
TCOF1-215ENST00000515516 RRASP10301 218 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-215ENST00000515516 LINC00205P59089 165 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 C19orf54Q5BKX5 351 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF429Q86V71 674 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 SPARTQ8N0X7 666 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 DCUN1D4Q92564 292 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 ALX4Q9H161 411 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-215ENST00000515516 SLA2Q9H6Q3 261 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 STUB1Q9UNE7 303 aa10.6□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF256Q9Y2P7 627 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-215ENST00000515516 SMIM30A4D0T7 59 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 ARPC1BO15143 372 aaKnown RBP10.59□□□□□ -0.71
TCOF1-215ENST00000515516 SAP30O75446 220 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 SCGNO76038 276 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 IGHV3-11P01762 117 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 TRGV3P03979 118 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
TCOF1-215ENST00000515516 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-215ENST00000515516 FGF9P31371 208 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-215ENST00000515516 CDNFQ49AH0 187 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 C11orf87Q6NUJ2 197 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 TPRA1Q86W33 373 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 BVESQ8NE79 360 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 ADTRPQ96IZ2 230 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 HARBI1Q96MB7 349 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 ST6GALNAC5Q9BVH7 336 aa10.59□□□□□ -0.71
TCOF1-215ENST00000515516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.59□□□□□ -0.71
TCOF1-215ENST00000515516 TXNL4BQ9NX01 149 aaKnown RBP10.59□□□□□ -0.71
TCOF1-215ENST00000515516 C13orf42A0A1B0GVH6 325 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 DTYMKP23919 212 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 SLURP1P55000 103 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 PITPNAQ00169 270 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 ASPHD1Q5U4P2 390 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 Q6ZS49 121 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 DLX4Q92988 240 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-215ENST00000515516 TMEM68Q96MH6 324 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 DAPK2Q9UIK4 370 aa10.58□□□□□ -0.72
TCOF1-215ENST00000515516 IGHV4OR15-8A0A075B7B6 117 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 A0A087WW49 117 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 A0A0G2JLM5 398 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 H3BUA1 57 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 GNG2P59768 71 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms