RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 KCTD9Q7L273 389 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 ZNF383Q8NA42 475 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 ZNF431Q8TF32 576 aaPredicted RBP13.59□□□□□ -0.23
AP3S1-208ENST00000515066 RBMXL1Q96E39 390 aaKnown RBP13.59□□□□□ -0.23
AP3S1-208ENST00000515066 DPM3Q9P2X0 92 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
AP3S1-208ENST00000515066 IGHV3OR16-10A0A075B7F0 116 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 IGHV1-69DA0A0B4J2H0 117 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 SNRPGP15A8MWD9 76 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 H0Y980 276 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 IGHV1-69P01742 117 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 IL3RAP26951 378 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 CBX3Q13185 183 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 TMEM187Q14656 261 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 ANKRD55Q3KP44 614 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 DYNAPQ8N1N2 210 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 CASTOR1Q8WTX7 329 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 NABP2Q9BQ15 211 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 LIN7CQ9NUP9 197 aaKnown RBP13.59□□□□□ -0.23
AP3S1-208ENST00000515066 F8P00451 2351 aa13.58□□□□□ -0.23
AP3S1-208ENST00000515066 hCG_2014768A0A024R1R8 64 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 NPFFO15130 113 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 RAMP3O60896 148 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 FSHBP01225 129 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 IFNA2P01563 188 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 PAX6P26367 422 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 ZNF816Q0VGE8 651 aaPredicted RBP13.58□□□□□ -0.24
AP3S1-208ENST00000515066 MIDNQ504T8 468 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 ZNF585BQ52M93 769 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 MINOS1Q5TGZ0 78 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 BRD3OSQ6XYD6 125 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 TGIF2LXQ8IUE1 241 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 CADM3Q8N126 398 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 LHFPL5Q8TAF8 219 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 MITD1Q8WV92 249 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 TMEM222Q9H0R3 208 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 GPN1Q9HCN4 374 aaPredicted RBP13.58□□□□□ -0.24
AP3S1-208ENST00000515066 TBL2Q9Y4P3 447 aaKnown RBP13.58□□□□□ -0.24
AP3S1-208ENST00000515066 MINOS1-NBL1R4GNA1 71 aa13.58□□□□□ -0.24
AP3S1-208ENST00000515066 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 RNF212BA8MTL3 300 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 A8MV72 311 aaPredicted RBP13.57□□□□□ -0.24
AP3S1-208ENST00000515066 LEUTXA8MZ59 168 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 CREBL2O60519 120 aaPredicted RBP13.57□□□□□ -0.24
AP3S1-208ENST00000515066 UCP1P25874 307 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 THBS3P49746 956 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 CATR1Q13166 79 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 OR2B11Q5JQS5 317 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 GPR157Q5UAW9 335 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 RPEQ96AT9 228 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 C18orf12Q96KH6 178 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 OR51J1Q9H342 316 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 PLXNB1O43157 2135 aa13.57□□□□□ -0.24
AP3S1-208ENST00000515066 IGHV1-3A0A0C4DH29 117 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 H0YJW9 148 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 CD5LO43866 347 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 OR5AN1Q8NGI8 311 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 KCNIP3Q9Y2W7 256 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 HIVEP2P31629 2446 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 DBX1A6NMT0 343 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 CDS2O95674 445 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 IGKV1-39P01597 117 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 GAPDHP04406 335 aaKnown RBP13.56□□□□□ -0.24
AP3S1-208ENST00000515066 IGKV1D-39P04432 117 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 CEACAM3P40198 252 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 LGALS4P56470 323 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 SSX2Q16385 188 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 LIN54Q6MZP7 749 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 LIAT1Q6ZQX7 453 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 SPAG16Q8N0X2 631 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 ADTRPQ96IZ2 230 aa13.56□□□□□ -0.24
AP3S1-208ENST00000515066 NSD1Q96L73 2696 aaPredicted RBP13.55□□□□□ -0.24
AP3S1-208ENST00000515066 TXNL1O43396 289 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 FCGR3BO75015 233 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 B3GALNT1O75752 331 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 ANXA3P12429 323 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 HABP2Q14520 560 aaPredicted RBP13.55□□□□□ -0.24
AP3S1-208ENST00000515066 C12orf45Q8N5I9 185 aaPredicted RBP13.55□□□□□ -0.24
AP3S1-208ENST00000515066 TMEM56Q96MV1 263 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 PHB2Q99623 299 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 FAM212BQ9NTI7 297 aaPredicted RBP13.55□□□□□ -0.24
AP3S1-208ENST00000515066 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
AP3S1-208ENST00000515066 A0A0B4J2A0 478 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
AP3S1-208ENST00000515066 IGKV1-16P04430 117 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 EPHA1P21709 976 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 C2orf68Q2NKX9 166 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 C11orf88Q6PI97 169 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 TCTEX1D1Q8N7M0 179 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 LRTM2Q8N967 370 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 CFHR4Q92496 578 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 MALSU1Q96EH3 234 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 SHPKQ9UHJ6 478 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 PRELID3BQ9Y3B1 194 aa13.54□□□□□ -0.24
AP3S1-208ENST00000515066 SOX21Q9Y651 276 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms