RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 NUDT3O95989 172 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 MT-ND4P03905 459 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 GIG44P09565 113 aaPredicted RBP2.28□□□□□ -2.04
CHD1-211ENST00000514344 ATF1P18846 271 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 BTF3P20290 206 aaKnown RBP2.28□□□□□ -2.04
CHD1-211ENST00000514344 FUT3P21217 361 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 CCL1P22362 96 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 PRKACGP22612 351 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 ATP6V1E1P36543 226 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 KCNJ3P48549 501 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 SMIM11AP58511 58 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 PAX5Q02548 391 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 FAM209BQ5JX69 171 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 ZNF66Q6ZN08 573 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 STHQ8IWL8 128 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 OR51A4Q8NGJ6 313 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 MARC2Q969Z3 335 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 IL4I1Q96RQ9 567 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 TSNAXQ99598 290 aaKnown RBP2.28□□□□□ -2.04
CHD1-211ENST00000514344 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 KRTAP9-3Q9BYQ3 159 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 FAM107BQ9H098 131 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 IFI27L2Q9H2X8 130 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 Q9H8V8 135 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 TAF9BQ9HBM6 251 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 IL1RAPQ9NPH3 570 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 TVP23BQ9NYZ1 205 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 RCC2Q9P258 522 aaKnown RBP2.28□□□□□ -2.04
CHD1-211ENST00000514344 ENOPH1Q9UHY7 261 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 BAIAP2Q9UQB8 552 aa2.28□□□□□ -2.04
CHD1-211ENST00000514344 SAMHD1Q9Y3Z3 626 aaKnown RBP2.28□□□□□ -2.04
CHD1-211ENST00000514344 IGHV3OR16-13A0A075B7E8 117 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 IGHV3-74A0A0B4J1X5 117 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 A0A1W2PP11 408 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 FAM90A7PA6NKC0 464 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 J3QRK9 145 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 RAB27BO00194 218 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 MAS1P04201 325 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 CLEC3BP05452 202 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 C8orf88P0DMB2 117 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 MYOD1P15172 320 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 C4BPBP20851 252 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 GPR183P32249 361 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 MC5RP33032 325 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 GINS1Q14691 196 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 RSU1Q15404 277 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 KISS1Q15726 138 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 C10orf55Q5SWW7 151 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 ZNF691Q5VV52 312 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 ZNF497Q6ZNH5 498 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 Q6ZSR3 168 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 SSX6Q7RTT6 188 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 SRSF12Q8WXF0 261 aaKnown RBP2.28□□□□□ -2.05
CHD1-211ENST00000514344 SPSB1Q96BD6 273 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 ORAI1Q96D31 301 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 TMEM68Q96MH6 324 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 RNF2Q99496 336 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 YIPF3Q9GZM5 350 aa2.28□□□□□ -2.05
CHD1-211ENST00000514344 SAMD4AQ9UPU9 718 aaKnown RBP2.28□□□□□ -2.05
CHD1-211ENST00000514344 TMA7Q9Y2S6 64 aaKnown RBP2.28□□□□□ -2.05
CHD1-211ENST00000514344 IGHV3OR16-12A0A075B7B8 117 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 A0A1W2PPQ1 181 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 EREGO14944 169 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 RAB29O14966 203 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 RBBP9O75884 186 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 BAG2O95816 211 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 OXTP01178 125 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 FABP3P05413 133 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 P0C879 139 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 SPART-AS1P0CW21 52 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 SERPINA2P20848 420 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 GCSHP23434 173 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 SOX2P48431 317 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 CCL18P55774 89 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 FAM3BP58499 235 aaPredicted RBP2.27□□□□□ -2.05
CHD1-211ENST00000514344 DEFB131AP59861 70 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 TP53I3Q53FA7 332 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 LIPKQ5VXJ0 399 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 DMKNQ6E0U4 476 aaPredicted RBP2.27□□□□□ -2.05
CHD1-211ENST00000514344 CDPF1Q6NVV7 123 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 SSX7Q7RTT5 188 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 MFSD4AQ8N468 514 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 STX19Q8N4C7 294 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 OR10H4Q8NGA5 316 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 OR5AN1Q8NGI8 311 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 ASB17Q8WXJ9 295 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 CCDC124Q96CT7 223 aaKnown RBP2.27□□□□□ -2.05
CHD1-211ENST00000514344 C7orf26Q96N11 449 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 UHRF2Q96PU4 802 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 FEVQ99581 238 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 FNDC4Q9H6D8 234 aaPredicted RBP2.27□□□□□ -2.05
CHD1-211ENST00000514344 TMEM14BQ9NUH8 114 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 FGFR1OP2Q9NVK5 253 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 ZNF586Q9NXT0 402 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 UFC1Q9Y3C8 167 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 LINC00588Q9Y4M8 146 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 TMEM14AQ9Y6G1 99 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 MFSD2BA6NFX1 497 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 HMX3A6NHT5 357 aa2.27□□□□□ -2.05
CHD1-211ENST00000514344 CCNB2O95067 398 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms