RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 HIST1H2BMQ99879 126 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 TUBG2Q9NRH3 451 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 CACNA1GO43497 2377 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 ZG16O60844 167 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 S1PR2O95136 353 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 CEACAM1P13688 526 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 SPNS3Q6ZMD2 512 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 C1QL4Q86Z23 238 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 LRRC29Q8WV35 223 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 R3HDM4Q96D70 268 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 CXXC4Q9H2H0 198 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 DMRT1Q9Y5R6 373 aa9.72□□□□□ -0.85
CTNND2-215ENST00000513588 ACP1P24666 158 aa9.71□□□□□ -0.85
CTNND2-215ENST00000513588 HOXA6P31267 233 aa9.71□□□□□ -0.85
CTNND2-215ENST00000513588 PCSK4Q6UW60 755 aa9.71□□□□□ -0.85
CTNND2-215ENST00000513588 RAB24Q969Q5 203 aa9.71□□□□□ -0.85
CTNND2-215ENST00000513588 PATZ1Q9HBE1 687 aaKnown RBP9.71□□□□□ -0.85
CTNND2-215ENST00000513588 CRYAAP02489 173 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 RAB9BQ9NP90 201 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 F6UZH7 168 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 WNT9BO14905 357 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 SLC31A2O15432 143 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 CELA3BP08861 270 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 SOX8P57073 446 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 GABRA6Q16445 453 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 HES3Q5TGS1 186 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 FAM78BQ5VT40 261 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 ARL6IP6Q8N6S5 226 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 GMPPAQ96IJ6 420 aaPredicted RBP9.71□□□□□ -0.86
CTNND2-215ENST00000513588 UHRF2Q96PU4 802 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 SDF2L1Q9HCN8 221 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 KCNIP2Q9NS61 270 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 FUT9Q9Y231 359 aa9.71□□□□□ -0.86
CTNND2-215ENST00000513588 TMEM210A6NLX4 147 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 IGKV1-5P01602 117 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 PAX9P55771 341 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 BCL2L2Q92843 193 aaPredicted RBP9.7□□□□□ -0.86
CTNND2-215ENST00000513588 SARAFQ96BY9 339 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 ZNF729A6NN14 1252 aaPredicted RBP9.7□□□□□ -0.86
CTNND2-215ENST00000513588 C9orf172C9J069 976 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 C12orf77C9JDV5 145 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 GYPAP02724 150 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 SFTPCP11686 197 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 HTD2P86397 168 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
CTNND2-215ENST00000513588 DEFB123Q8N688 67 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 DEFB108BQ8NET1 73 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 PCGF1Q9BSM1 259 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 PARLQ9H300 379 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 TREM2Q9NZC2 230 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 ODAMA1E959 279 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 ZNF503-AS2A6NEH8 195 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 LRRC30A6NM36 301 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 KBTBD11O94819 623 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 CD55P08174 381 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 PMS2P11Q13670 270 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 ATP1A1-AS1Q5TC04 95 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 INO80CQ6PI98 192 aaPredicted RBP9.7□□□□□ -0.86
CTNND2-215ENST00000513588 ZNF497Q6ZNH5 498 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 KLF14Q8TD94 323 aaPredicted RBP9.7□□□□□ -0.86
CTNND2-215ENST00000513588 HSD17B10Q99714 261 aaKnown RBP9.7□□□□□ -0.86
CTNND2-215ENST00000513588 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 USF3Q68DE3 2245 aa9.7□□□□□ -0.86
CTNND2-215ENST00000513588 TRAV1-1A0A0B4J248 108 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 IGHV2-5P01817 119 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 IRF2P14316 349 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 GFI1BQ5VTD9 330 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 ZDHHC16Q969W1 377 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 MISP3Q96FF7 219 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 SMPD2O60906 423 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 TRIOO75962 3097 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 COL10A1Q03692 680 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 ZNF90Q03938 601 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 GAMTQ14353 236 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 MBD3L1Q8WWY6 194 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 ANAPC16Q96DE5 110 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 SAMD10Q9BYL1 202 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 RAMP3O60896 148 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 SSTR5P35346 364 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 ARL16Q0P5N6 197 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 SERTAD4Q9NUC0 356 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 SPTBN2O15020 2390 aa9.69□□□□□ -0.86
CTNND2-215ENST00000513588 CACNA1HO95180 2353 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 CADP27708 2225 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
CTNND2-215ENST00000513588 CD1BP29016 333 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 PSG7Q13046 419 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 CYP2G1PQ6ZSU1 146 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 OPN3Q9H1Y3 402 aaPredicted RBP9.68□□□□□ -0.86
CTNND2-215ENST00000513588 PROCRQ9UNN8 238 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 PRUNE2Q8WUY3 3088 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 TMEM250H0YL14 139 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 CLDN14O95500 239 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 RTP5Q14D33 572 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 Q6ZPA2 131 aa9.68□□□□□ -0.86
CTNND2-215ENST00000513588 FAM214BQ7L5A3 538 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms