RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 MGAM2Q2M2H8 2515 aa12.52□□□□□ -0.4
DDX41-214ENST00000512334 HPGDSO60760 199 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 TEX38Q6PEX7 206 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.41
DDX41-214ENST00000512334 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 ZNF645Q8N7E2 425 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 CLCC1Q96S66 551 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
DDX41-214ENST00000512334 OR51J1Q9H342 316 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 METTL1Q9UBP6 276 aaKnown RBP12.52□□□□□ -0.41
DDX41-214ENST00000512334 MRPS7Q9Y2R9 242 aaKnown RBP12.52□□□□□ -0.41
DDX41-214ENST00000512334 PKD1L1Q8TDX9 2849 aa12.52□□□□□ -0.41
DDX41-214ENST00000512334 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 FAM25AB3EWG3 89 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 FAM25CB3EWG5 89 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 FAM25GB3EWG6 89 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 TUSC2O75896 110 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 HLA-DQB1P01920 261 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 APOA1P02647 267 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 IGF1P05019 195 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 FCGR2CP31995 323 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 PSG5Q15238 335 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 BVESQ8NE79 360 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 ABHD5Q8WTS1 349 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
DDX41-214ENST00000512334 NUDT19A8MXV4 375 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 SLC25A17O43808 307 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 SLC22A5O76082 557 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 PF4P02776 101 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 RRASP10301 218 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 ZNF182P17025 639 aaPredicted RBP12.5□□□□□ -0.41
DDX41-214ENST00000512334 ELK1P19419 428 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 DUTP33316 252 aaKnown RBP12.5□□□□□ -0.41
DDX41-214ENST00000512334 PRSS3P35030 304 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 RPL23AP62750 156 aaKnown RBP12.5□□□□□ -0.41
DDX41-214ENST00000512334 TAGLNQ01995 201 aaKnown RBP12.5□□□□□ -0.41
DDX41-214ENST00000512334 CXorf66Q5JRM2 361 aaPredicted RBP12.5□□□□□ -0.41
DDX41-214ENST00000512334 SNAPC3Q92966 411 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 HARBI1Q96MB7 349 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 CMTM3Q96MX0 182 aa12.5□□□□□ -0.41
DDX41-214ENST00000512334 G3V318 75 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 FCN1O00602 326 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 SHOXO15266 292 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 NOL3O60936 208 aaKnown RBP12.49□□□□□ -0.41
DDX41-214ENST00000512334 SPDEFO95238 335 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 AADACP22760 399 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
DDX41-214ENST00000512334 NDPQ00604 133 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 CDK10Q15131 360 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 ECSCRQ19T08 205 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 ZNF660Q6AZW8 331 aaPredicted RBP12.49□□□□□ -0.41
DDX41-214ENST00000512334 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 KLHL30-AS1Q8NEE0 82 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 OR5AP2Q8NGF4 316 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 SECTM1Q8WVN6 248 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 ZFP57Q9NU63 452 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
DDX41-214ENST00000512334 A3GALT2U3KPV4 340 aa12.49□□□□□ -0.41
DDX41-214ENST00000512334 VWFP04275 2813 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 CMYA5Q8N3K9 4069 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 TRAV41A0A0B4J266 112 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 LINC00473A8K010 186 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 CRYZL1O95825 349 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 CA2P00918 260 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 RPLP1P05386 114 aaKnown RBP12.48□□□□□ -0.41
DDX41-214ENST00000512334 ELANEP08246 267 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 LGALS7P47929 136 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 FXYD4P59646 89 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 CX3CL1P78423 397 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 FOXE3Q13461 319 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 SPCS2Q15005 226 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 KCTD9Q7L273 389 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 ZNF580Q9UK33 172 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
DDX41-214ENST00000512334 FCGR3BO75015 233 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 PPYP01298 95 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 PMP2P02689 132 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 CD33P20138 364 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 CFHR3Q02985 330 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 OR2B11Q5JQS5 317 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 C18orf65Q6ZTR6 163 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 C8orf86Q6ZUL3 223 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 C1QL4Q86Z23 238 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 OR5H2Q8NGV7 314 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 TCTEX1D2Q8WW35 142 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 DDB2Q92466 427 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms