RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 EIF4EBP1Q13541 118 aaPredicted RBP12.3□□□□□ -0.44
PHF3-209ENST00000509330 MIDNQ504T8 468 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 STX12Q86Y82 276 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 OR2G3Q8NGZ4 309 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 LSM10Q969L4 123 aaKnown RBP12.3□□□□□ -0.44
PHF3-209ENST00000509330 SDSLQ96GA7 329 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 SLC25A10Q9UBX3 287 aaPredicted RBP12.3□□□□□ -0.44
PHF3-209ENST00000509330 KRBOX1C9JBD0 128 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 CHRNB4P30926 498 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
PHF3-209ENST00000509330 DLX1P56177 255 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 H2BFWTQ7Z2G1 175 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 KDF1Q8NAX2 398 aaPredicted RBP12.3□□□□□ -0.44
PHF3-209ENST00000509330 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 NDRG3Q9UGV2 375 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 JPT1Q9UK76 154 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 FBXO7Q9Y3I1 522 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 PPIAL4EA0A075B759 164 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 KBTBD11-OT1A0A1B0GTJ5 212 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 MARCH11A6NNE9 402 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 PPIAL4DF5H284 164 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 PPIAL4FP0DN26 164 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 M6PRP20645 277 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 UBE2KP61086 200 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 ST6GALNAC3Q8NDV1 305 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 SMIM8Q96KF7 97 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 RBKSQ9H477 322 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
PHF3-209ENST00000509330 TMEM106BQ9NUM4 274 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 PPIAL4AQ9Y536 164 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 GPR37O15354 613 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 ZG16O60844 167 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 CD55P08174 381 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 SPP1P10451 314 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 MUC1P15941 1255 aaPredicted RBP12.29□□□□□ -0.44
PHF3-209ENST00000509330 TRAT1Q6PIZ9 186 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
PHF3-209ENST00000509330 SAA2-SAA4A0A096LPE2 208 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 TMEM178BH3BS89 294 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 SAA2P0DJI9 122 aaPredicted RBP12.28□□□□□ -0.44
PHF3-209ENST00000509330 ADCYAP1P18509 176 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 ZBTB34Q8NCN2 500 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 Q8TCH9 128 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 RSG1Q9BU20 258 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 MMP26Q9NRE1 261 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 CACNA1AO00555 2505 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 NKX6-3A6NJ46 265 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 RPL31P62899 125 aaKnown RBP12.28□□□□□ -0.44
PHF3-209ENST00000509330 ZNF266Q14584 549 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 LRRC46Q96FV0 321 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
PHF3-209ENST00000509330 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 YPEL1O60688 119 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 OR9G9P0C7N8 305 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 TNFRSF9Q07011 255 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 PJVKQ0ZLH3 352 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 THNSL2Q86YJ6 484 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 LILRB2Q8N423 598 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.44
PHF3-209ENST00000509330 YPEL2Q96QA6 119 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 HSD17B10Q99714 261 aaKnown RBP12.27□□□□□ -0.44
PHF3-209ENST00000509330 MED13LQ71F56 2210 aa12.27□□□□□ -0.44
PHF3-209ENST00000509330 TRAV38-1A0A0B4J264 116 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 F8W036 122 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 F2RL2O00254 374 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 TSPAN15O95858 294 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 REG1BP48304 166 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 BLOC1S1P78537 153 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 AKIRIN2Q53H80 203 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 RAB40CQ96S21 281 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 QTRT1Q9BXR0 403 aaKnown RBP12.27□□□□□ -0.45
PHF3-209ENST00000509330 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 ZFYVE26Q68DK2 2539 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 C9JQL5 133 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 TOR1AO14656 332 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 SULT1A1P50225 295 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 GUCA2BQ16661 112 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 TEX36Q5VZQ5 186 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 MUC15Q8N387 334 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 CTSZQ9UBR2 303 aa12.27□□□□□ -0.45
PHF3-209ENST00000509330 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 SEC11BP0C7V7 166 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 DANCRP0C864 163 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 CGB3P0DN86 165 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 CGB7P0DN87 165 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 APOBEC3AP31941 199 aaPredicted RBP12.26□□□□□ -0.45
PHF3-209ENST00000509330 UQCRFS1P47985 274 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 ZNF66Q6ZN08 573 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms