RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MLNP12872 115 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 LGALS3P17931 250 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 LCN1P31025 176 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 CEBPDP49716 269 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 C2orf80Q0P641 193 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 FUT5Q11128 374 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 IFT88Q13099 833 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 ZNF141Q15928 474 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 AP1ARQ63HQ0 302 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 LGALS9CQ6DKI2 356 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 PLET1Q6UQ28 207 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 C10orf111Q8N326 155 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 OR1P1Q8NH06 330 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 THRSPQ92748 146 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 SEH1LQ96EE3 360 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 TEX37Q96LM6 180 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 CCDC42Q96M95 316 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 SDF2Q99470 211 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 BCL2L14Q9BZR8 327 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 TAS2R7Q9NYW3 318 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 PCTPQ9UKL6 214 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 KPTNQ9Y664 436 aa2.1□□□□□ -2.07
TOPBP1-206ENST00000508524 IGHV3OR15-7A0A075B7D8 119 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 DNASE2O00115 360 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 ZNF208O43345 1280 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 TIMM8AO60220 97 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 SCN2BO60939 215 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 UBL3O95164 117 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 CLIC3O95833 236 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 GYPAP02724 150 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 PTMAP06454 111 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 SNRPAP09012 282 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 CCNOP22674 350 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 DTYMKP23919 212 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 MYCNOSP40205 109 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 UBE2E1P51965 193 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 ATP6V0D1P61421 351 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 PPP1CBP62140 327 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 C2orf54Q08AI8 447 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 VPS26BQ4G0F5 336 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 XKR7Q5GH72 579 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 PABPC1L2AQ5JQF8 200 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 SPANXN3Q5MJ09 141 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 PRAMEF6Q5VXH4 476 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 TTC19Q6DKK2 380 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 SLC25A48Q6ZT89 311 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 LINC00336Q6ZUF6 198 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 LRRC8AQ8IWT6 810 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 OR5AS1Q8N127 324 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 SLC22A24Q8N4F4 322 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 MMGT1Q8N4V1 131 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 FAM216BQ8N7L0 139 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 OR10R2Q8NGX6 335 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 AKR7LQ8NHP1 331 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 ZNF563Q8TA94 476 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 TMEM234Q8WY98 164 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 TUBGCP3Q96CW5 907 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 PIGUQ9H490 435 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 POPDC3Q9HBV1 291 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 TMEM38BQ9NVV0 291 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 AHSPQ9NZD4 102 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 IFNKQ9P0W0 207 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 VPS29Q9UBQ0 182 aa2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 ZNF230Q9UIE0 474 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 POLR3HQ9Y535 204 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-206ENST00000508524 IGKV1D-42A0A075B6H8 117 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 IGHV3OR16-8A0A075B7F1 116 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 IGLV1-36A0A0B4J1U3 117 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 IGKV1D-43A0A0B4J1Z2 117 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 C5orf49A4QMS7 147 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 LRRN3E7EW58 273 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 MRPS12O15235 138 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 FSTL3O95633 263 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 KRT14P02533 472 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 SERPINE1P05121 402 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 IFI6P09912 130 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 ZNF735P0CB33 412 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 DBTP11182 482 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 GFAPP14136 432 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 NCF2P19878 526 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 KITLGP21583 273 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 CD24P25063 80 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 STOMP27105 288 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 TGFBR1P36897 503 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 RPS5P46782 204 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 CCNG1P51959 295 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 POLR2HP52434 150 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 FGL1Q08830 312 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 CLINT1Q14677 625 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 TBC1D28Q2M2D7 210 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 ZNF181Q2M3W8 571 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 HHATQ5VTY9 493 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 C1orf140Q5VVS0 124 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 ZNF826PQ6ZT77 177 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 EIF3MQ7L2H7 374 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 OR4X2Q8NGF9 303 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 OR10J6PQ8NGY7 276 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 OR13G1Q8NGZ3 307 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 OR5AK3PQ8NH89 298 aa2.08□□□□□ -2.08
TOPBP1-206ENST00000508524 CLHC1Q8NHS4 586 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms