RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 TRAV41A0A0B4J266 112 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 J3QRK9 145 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 SHOXO15266 292 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 NFYAP23511 347 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-211ENST00000507689 TGFBR1P36897 503 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 NCS1P62166 190 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 ZNF645Q8N7E2 425 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 ZNF383Q8NA42 475 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 RITA1Q96K30 269 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 DCUN1D5Q9BTE7 237 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 GPR61Q9BZJ8 451 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 MRPS7Q9Y2R9 242 aaKnown RBP12.31□□□□□ -0.44
COL1A1-211ENST00000507689 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
COL1A1-211ENST00000507689 IGKV1D-8A0A087WSZ0 117 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 ATP6V0E1O15342 81 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 TUSC2O75896 110 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 CNIH1O95406 144 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 PSG5Q15238 335 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 ECSCRQ19T08 205 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 HOGA1Q86XE5 327 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 A3GALT2U3KPV4 340 aa12.3□□□□□ -0.44
COL1A1-211ENST00000507689 IGHV7-81A0A0B4J1V7 117 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 SSX5O60225 188 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 CREBL2O60519 120 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-211ENST00000507689 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
COL1A1-211ENST00000507689 DUS4LO95620 317 aaKnown RBP12.29□□□□□ -0.44
COL1A1-211ENST00000507689 IGHG4P01861 327 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 IGKV1-16P04430 117 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 VMA21Q3ZAQ7 101 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 ANKRD13BQ86YJ7 626 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 C1QL4Q86Z23 238 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 BVESQ8NE79 360 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 DPF1Q92782 380 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 BORCS5Q969J3 196 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
COL1A1-211ENST00000507689 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
COL1A1-211ENST00000507689 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 SLC25A17O43808 307 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 HLA-DQB1P01920 261 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 RPLP1P05386 114 aaKnown RBP12.28□□□□□ -0.44
COL1A1-211ENST00000507689 FCGR2CP31995 323 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 PRSS3P35030 304 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 MYCNOSP40205 109 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 RAB25P57735 213 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 GNB1P62873 340 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 CX3CL1P78423 397 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 PYHIN1Q6K0P9 492 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 ZNF562Q6V9R5 426 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 C8orf86Q6ZUL3 223 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
COL1A1-211ENST00000507689 RCC1LQ96I51 464 aaKnown RBP12.28□□□□□ -0.44
COL1A1-211ENST00000507689 HSD17B10Q99714 261 aaKnown RBP12.28□□□□□ -0.44
COL1A1-211ENST00000507689 MCRIP2Q9BUT9 160 aaKnown RBP12.28□□□□□ -0.44
COL1A1-211ENST00000507689 A0A1W2PN81 502 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 PROP1O75360 226 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 ACTL6BO94805 426 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 CRYZL1O95825 349 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 CA2P00918 260 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 APOA1P02647 267 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 SMIM18P0DKX4 95 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 DUTP33316 252 aaKnown RBP12.27□□□□□ -0.45
COL1A1-211ENST00000507689 CHRNA7P36544 502 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 CDX1P47902 265 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-211ENST00000507689 TAS2R46P59540 309 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 TAS2R20P59543 309 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 HERV-K104P61576 105 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 UNQ5815/PRO19632Q6UWF5 114 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 GVQW1Q8N7I0 195 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 OR5AP2Q8NGF4 316 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-211ENST00000507689 SECTM1Q8WVN6 248 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 TCTEX1D2Q8WW35 142 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 ARPC1AQ92747 370 aa12.27□□□□□ -0.45
COL1A1-211ENST00000507689 FOXA2Q9Y261 457 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-211ENST00000507689 RBMX2Q9Y388 322 aaKnown RBP12.27□□□□□ -0.45
COL1A1-211ENST00000507689 PKD1L1Q8TDX9 2849 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 MEIS3P1A6NDR6 274 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 G3V318 75 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 G3V4G9 280 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 FCGR3BO75015 233 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 GABARAPO95166 117 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 FCER2P06734 321 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 LINC00205P59089 165 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 FXYD3Q14802 87 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 CDK10Q15131 360 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 TMEM177Q53S58 311 aa12.26□□□□□ -0.45
COL1A1-211ENST00000507689 ACTBL2Q562R1 376 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms