RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 ZNRD1Q9P1U0 126 aa1.89□□□□□ -2.11
RFC1-209ENST00000504974 DUX4Q9UBX2 424 aa1.89□□□□□ -2.11
RFC1-209ENST00000504974 TMEM14AQ9Y6G1 99 aa1.89□□□□□ -2.11
RFC1-209ENST00000504974 ANK3Q12955 4377 aaKnown RBP1.89□□□□□ -2.11
RFC1-209ENST00000504974 TRRAPQ9Y4A5 3859 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 A0A087WUJ7 227 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ARPC4-TTLL3A0A0A6YYG9 625 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 LOC100653049A0A140TA62 436 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 C7orf66A4D0T2 115 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TRAPPC13A5PLN9 417 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 LRCOL1A6NCL2 159 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 CPSF4LA6NMK7 179 aaKnown RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 LYRM9A8MSI8 78 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ZNF705GA8MUZ8 300 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 FTCDNL1E5RQL4 147 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 RPL36A-HNRNPH2H7BZ11 118 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 M0QX08 132 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 SIRPB1O00241 398 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 KPNA4O00629 521 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 TPST1O60507 370 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 RP2O75695 350 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 KRT34O76011 436 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 OR5F1O95221 314 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 IGF2P01344 180 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ARG1P05089 322 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 COX4I1P13073 169 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 NQO1P15559 274 aaKnown RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 DTYMKP23919 212 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 LOXP28300 417 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 GRPRP30550 384 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 SSTR5P35346 364 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 RBM34P42696 430 aaKnown RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 RPS5P46782 204 aaKnown RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 NUDT2P50583 147 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 GZMMP51124 257 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ATP5J2P56134 94 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TAS2R41P59536 307 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 GNGT1P63211 74 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 H3F3AP84243 136 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 HOXC5Q00444 222 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 BSPH1Q075Z2 132 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 C1DQ13901 141 aaKnown RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 OR1Q1Q15612 314 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TSC22D1Q15714 1073 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ORMDL2Q53FV1 153 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 C5orf47Q569G3 176 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TIMM23BQ5SRD1 257 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 NCMAPQ5T1S8 102 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ZNF684Q5T5D7 378 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 GPR107Q5VW38 600 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TTC33Q6PID6 262 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 AAED1Q7RTV5 226 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 MICU2Q8IYU8 434 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 OFCC1Q8IZS5 231 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 ZNF709Q8N972 641 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 OR5J2Q8NH18 312 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 COQ8AQ8NI60 647 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 APH1BQ8WW43 257 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 LZICQ8WZA0 190 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TAMM41Q96BW9 452 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 MUCL1Q96DR8 90 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 CMTM5Q96DZ9 223 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 PRRC1Q96M27 445 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 TIMM17AQ99595 171 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 HOPXQ9BPY8 73 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 ZNF426Q9BUY5 554 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 RSPO3Q9BXY4 272 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 REG4Q9BYZ8 158 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 LINC00470Q9BZP3 86 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 SLC19A3Q9BZV2 496 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 SAV1Q9H4B6 383 aaPredicted RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 NEK6Q9HC98 313 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 FAIMQ9NVQ4 179 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 CCDC59Q9P031 241 aaKnown RBP1.88□□□□□ -2.11
RFC1-209ENST00000504974 ZNF229Q9UJW7 825 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 STAB2Q8WWQ8 2551 aa1.88□□□□□ -2.11
RFC1-209ENST00000504974 NACAE9PAV3 2078 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 IGLV1-50A0A075B6I6 118 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 A0A075B6Q4 140 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 IGLV1-36A0A0B4J1U3 117 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 LOC102725191A0A1B0GVB3 256 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 TMEM223A0PJW6 202 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 GMNCA6NCL1 334 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 DPRXA6NFQ7 191 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ZNF99A8MXY4 864 aaPredicted RBP1.87□□□□□ -2.11
RFC1-209ENST00000504974 CENPBD1B2RD01 187 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 LRRN3E7EW58 273 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 SMKR1H3BMG3 65 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 M0R1B8 84 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CXCR6O00574 342 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 NME4O00746 187 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 PLPP3O14495 311 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 DCTN3O75935 186 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ZNF682O95780 498 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 FAM107AO95990 144 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 SERPINA1P01009 418 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 IFNW1P05000 195 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 CD3GP09693 182 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 ASAH2BP0C7U1 165 aa1.87□□□□□ -2.11
RFC1-209ENST00000504974 MUC1P15941 1255 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms