RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 HARBI1Q96MB7 349 aa5.18□□□□□ -1.58
NPIPB3-203ENST00000504841 OR14A2Q96R54 314 aa5.18□□□□□ -1.58
NPIPB3-203ENST00000504841 SULT4A1Q9BR01 284 aa5.18□□□□□ -1.58
NPIPB3-203ENST00000504841 FAAP24Q9BTP7 215 aa5.18□□□□□ -1.58
NPIPB3-203ENST00000504841 SLC35D1Q9NTN3 355 aa5.18□□□□□ -1.58
NPIPB3-203ENST00000504841 TRBV5-5A0A0J9YX44 114 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 C2orf70A6NJV1 201 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 BMPR1BO00238 502 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 EREGO14944 169 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 AIREO43918 545 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 CIB2O75838 187 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 SCAF4O95104 1147 aaKnown RBP5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 HLA-AP01891 365 aaKnown RBP5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 ALPLP05186 524 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 LIMS3P0CW19 117 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 LIMS4P0CW20 117 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 FOLR2P14207 255 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 ETV1P50549 477 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 RHOGP84095 191 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 TNXAQ16473 311 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 DEFB114Q30KQ6 69 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 Q499Y3 187 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 CCDC58Q4VC31 144 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 LY6G6FQ5SQ64 297 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 OR10K2Q6IF99 312 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 TMPRSS11AQ6ZMR5 421 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 PDPNQ86YL7 162 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 OR52B4Q8NGK2 314 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 KCNG3Q8TAE7 436 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 THRSPQ92748 146 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 SMIM19Q96E16 107 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 USMG5Q96IX5 58 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 RNF5Q99942 180 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 HDHD3Q9BSH5 251 aaPredicted RBP5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 C11orf54Q9H0W9 315 aaPredicted RBP5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 KCNK15Q9H427 330 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 ZNF230Q9UIE0 474 aaPredicted RBP5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 ZNF221Q9UK13 617 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 LRRC42Q9Y546 428 aa5.17□□□□□ -1.58
NPIPB3-203ENST00000504841 MSGN1A6NI15 193 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 PPP5D1E7EU14 171 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 PROP1O75360 226 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 TUSC2O75896 110 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 LALBAP00709 142 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 IGLV2-23P01705 113 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 OR9G9P0C7N8 305 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 GABRB1P18505 474 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 ZBTB25P24278 435 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 CAPGP40121 348 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 CEACAM6P40199 344 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 HLA-DRB3P79483 266 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 ATP5G2Q06055 141 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 DEFB135Q30KP9 77 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 MOB1BQ7L9L4 216 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 TMEM61Q8N0U2 210 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 CBR4Q8N4T8 237 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 ADAD2Q8NCV1 583 aaKnown RBP5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 PYDC1Q8WXC3 89 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 ACOT12Q8WYK0 555 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 TMEM68Q96MH6 324 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 Q96MT0 163 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 AGMATQ9BSE5 352 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 AKIP1Q9NQ31 210 aa5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 RPL36Q9Y3U8 105 aaKnown RBP5.16□□□□□ -1.58
NPIPB3-203ENST00000504841 TRBV5-7A0A0A0MS05 114 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 ZNF320A2RRD8 509 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 FAM223BA6NKX1 122 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 SHOXO15266 292 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 OGG1O15527 345 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 SPRY2O43597 315 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 OR2J3O76001 311 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 NDUFB8O95169 186 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 OR2C1O95371 312 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 IGHV3-23P01764 117 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 SCTP09683 121 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 MYL12AP19105 171 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 HTR2CP28335 458 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 BMI1P35226 326 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 KIR2DS2P43631 304 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 RPS11P62280 158 aaKnown RBP eCLIP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 TAGLNQ01995 201 aaKnown RBP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 ZNF45Q02386 682 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 CBX3Q13185 183 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 SMN1Q16637 294 aaKnown RBP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 YIF1BQ5BJH7 314 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 ZNF57Q68EA5 555 aaPredicted RBP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 ZFP1Q6P2D0 407 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 IDO2Q6ZQW0 420 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 FAM223AQ8IWN6 122 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 NKAIN3Q8N8D7 197 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 RHOXF1Q8NHV9 184 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 PHLDA1Q8WV24 401 aaPredicted RBP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 APH1BQ8WW43 257 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 SRSF12Q8WXF0 261 aaKnown RBP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 GGHQ92820 318 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 PGLYRP3Q96LB9 341 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 SLC29A1Q99808 456 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 NICN1Q9BSH3 213 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 TMEM59Q9BXS4 323 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 OR2D2Q9H210 308 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms