RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 TCTEX1D2Q8WW35 142 aa11.19□□□□□ -0.62
CYSTM1-202ENST00000504227 GSX1Q9H4S2 264 aaPredicted RBP11.19□□□□□ -0.62
CYSTM1-202ENST00000504227 KCNIP3Q9Y2W7 256 aa11.19□□□□□ -0.62
CYSTM1-202ENST00000504227 PRELID3BQ9Y3B1 194 aa11.19□□□□□ -0.62
CYSTM1-202ENST00000504227 MTORP42345 2549 aa11.19□□□□□ -0.62
CYSTM1-202ENST00000504227 ZNF469Q96JG9 3925 aaPredicted RBP11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 INMT-MINDY4F8WBC2 141 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 APOA2P02652 100 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 BRS3P32247 399 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 MC5RP33032 325 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 KIR2DS2P43631 304 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 UBE2MP61081 183 aaKnown RBP11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 SCGB2A2Q13296 93 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 EIF4EBP1Q13541 118 aaPredicted RBP11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 TMEM128Q5BJH2 165 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 KCTD9Q7L273 389 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 OR51H1Q8NH63 302 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 GPHA2Q96T91 129 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 NABP2Q9BQ15 211 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 MARVELD1Q9BSK0 173 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 MEGF9Q9H1U4 602 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 CDC42EP3Q9UKI2 254 aa11.18□□□□□ -0.62
CYSTM1-202ENST00000504227 A0A1W2PPI3 338 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 CRYM-AS1A6NIL9 109 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 LINC00473A8K010 186 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 TIMM23O14925 209 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 PEX14O75381 377 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 B3GALNT1O75752 331 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 DHFRP00374 187 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 ANXA7P20073 488 aaKnown RBP11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 F2RP25116 425 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 RAG2P55895 527 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 RAB25P57735 213 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 LINC00205P59089 165 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 RPL30P62888 115 aaKnown RBP11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 CBX3Q13185 183 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 OXA1LQ15070 435 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 RTL8BQ17RB0 113 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 BCL6BQ8N143 479 aaPredicted RBP11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 ZNF383Q8NA42 475 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 OR5AN1Q8NGI8 311 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 CD300LFQ8TDQ1 290 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 CHPT1Q8WUD6 406 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 C22orf15Q8WYQ4 148 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 TMEM230Q96A57 120 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 BEX1Q9HBH7 125 aa11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 LIN7CQ9NUP9 197 aaKnown RBP11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 SOX21Q9Y651 276 aaPredicted RBP11.17□□□□□ -0.62
CYSTM1-202ENST00000504227 C3orf85A0A1B0GTC6 90 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 H0YJW9 148 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 H7C2Y5 167 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 SERPINE2P07093 398 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 RRASP10301 218 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 ANXA3P12429 323 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 VAMP1P23763 118 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 PAX6P26367 422 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 CD1BP29016 333 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 RAB13P51153 203 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 DHODHQ02127 395 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 C4orf46Q504U0 113 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 SPAG16Q8N0X2 631 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 CAPSLQ8WWF8 208 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 SLC35D1Q9NTN3 355 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
CYSTM1-202ENST00000504227 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 VGLL3A8MV65 326 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 H0Y980 276 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 PRAF2O60831 178 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 FCGR3BO75015 233 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 IFNA2P01563 188 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 IL5P05113 134 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 OR4E1P0C645 316 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 VSIG10L2P0DP72 767 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 SRD5A1P18405 259 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 MECP2P51608 486 aaKnown RBP11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 DYNLT3P51808 116 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 PPP1R1AQ13522 171 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 HABP2Q14520 560 aaPredicted RBP11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 AANATQ16613 207 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 LRRC75BQ2VPJ9 315 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 SP6Q3SY56 376 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 OR2B11Q5JQS5 317 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 DDB2Q92466 427 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 GALNT14Q96FL9 552 aa11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 FAM212BQ9NTI7 297 aaPredicted RBP11.15□□□□□ -0.62
CYSTM1-202ENST00000504227 C9orf170A2RU37 121 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 RBFOX2O43251 390 aaKnown RBP eCLIP11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 SFT2D2O95562 160 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 OR5AC1P0C628 307 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 LPAR6P43657 344 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms