RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RAB7AP51149 207 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 TMEM30BQ3MIR4 351 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 FAM122CQ6P4D5 195 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 OR5C1Q8NGR4 320 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 ABHD14AQ9BUJ0 271 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 KCNJ16Q9NPI9 418 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 IDI2-AS1Q9NZ38 188 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 SLC25A10Q9UBX3 287 aaPredicted RBP17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 PRELID1Q9Y255 219 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 RELNP78509 3460 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 CST7O76096 145 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 IGHV3-7P01780 117 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 DYNLT3P51808 116 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 ZNF266Q14584 549 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 ZNF273Q14593 569 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 CLINT1Q14677 625 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 CT45A1Q5HYN5 189 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 ZNF439Q8NDP4 499 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 CT45A3Q8NHU0 189 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 LINC00312Q9Y6C7 94 aa17.61■□□□□ 0.41
UBE2D3-216ENST00000503742 hADV38S2A0JD32 116 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 NUDT19A8MXV4 375 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 RAB29O14966 203 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 MED6O75586 246 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 NDUFB7P17568 137 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 TAS2R30P59541 319 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 TFF3Q07654 80 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 RPL39P5Q59GN2 51 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 AIFM2Q9BRQ8 373 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 HSPB7Q9UBY9 170 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 MEF2CQ06413 473 aaPredicted RBP17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 UQCC3Q6UW78 93 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 LEAP2Q969E1 77 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 TMEM204Q9BSN7 226 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 MMP26Q9NRE1 261 aa17.6■□□□□ 0.41
UBE2D3-216ENST00000503742 M0R1X1 148 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 SULT1A1P50225 295 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 BLOC1S1P78537 153 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 TNFRSF9Q07011 255 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 ZNF672Q499Z4 452 aaPredicted RBP17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 C1orf229Q6ZS94 237 aaPredicted RBP17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 HSD17B11Q8NBQ5 300 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 PARP11Q9NR21 331 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 H3BP45 60 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 RBFOX2O43251 390 aaKnown RBP eCLIP17.59■□□□□ 0.411e-7■□□□□ 10
UBE2D3-216ENST00000503742 MMP23AO75900 390 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 DANCRP0C864 163 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 IAPPP10997 89 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 UBE2KP61086 200 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 STX12Q86Y82 276 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 MUC15Q8N387 334 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 TMEM217Q8N7C4 229 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 SH3BGRL3Q9H299 93 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 C19orf12Q9NSK7 152 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 PSENENQ9NZ42 101 aa17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 RPUSD1Q9UJJ7 312 aaKnown RBP17.59■□□□□ 0.41
UBE2D3-216ENST00000503742 CACNA1AO00555 2505 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 IGHV1-69-2A0A0G2JMI3 117 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 BTNL8Q6UX41 500 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 LYPD2Q6UXB3 125 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 IL34Q6ZMJ4 242 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 DDB2Q92466 427 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 KAAG1Q9UBP8 84 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 NBASA2RRP1 2371 aa17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 ANKHD1Q8IWZ3 2542 aaKnown RBP17.58■□□□□ 0.4
UBE2D3-216ENST00000503742 MARCH11A6NNE9 402 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 HPRT1P00492 218 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 H2BFWTQ7Z2G1 175 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 OR10A7Q8NGE5 316 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 LYPD6BQ8NI32 183 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 ZNF251Q9BRH9 671 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 A0A1W2PPE3 182 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 FCGR3BO75015 233 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 NFYBP25208 207 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 RPL31P62899 125 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 PJVKQ0ZLH3 352 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 PRAMEF5Q5TYX0 476 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 BPIFCQ8NFQ6 507 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 R3HDM4Q96D70 268 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 ATP5SQ99766 215 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 HRH4Q9H3N8 390 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 RBKSQ9H477 322 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 COL6A6A6NMZ7 2263 aa17.57■□□□□ 0.4
UBE2D3-216ENST00000503742 SAA2-SAA4A0A096LPE2 208 aa17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 SAA2P0DJI9 122 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 HCFC1P51610 2035 aa17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 TMEM267Q0VDI3 215 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 Q6ZRG5 221 aa17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 TSNAXQ99598 290 aaKnown RBP17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 CTSZQ9UBR2 303 aa17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 CACFD1Q9UGQ2 172 aa17.56■□□□□ 0.4
UBE2D3-216ENST00000503742 YLPM1P49750 1951 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 ATP6V0CP27449 155 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 KIR2DS2P43631 304 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 RAB5CP51148 216 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 SLC25A48Q6ZT89 311 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 GAL3ST2Q9H3Q3 398 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 PRELID3BQ9Y3B1 194 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms