RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PEX14O75381 377 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 HERV-K104P61576 105 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 TSPAN5P62079 268 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 C9orf152Q5JTZ5 239 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 DHRS11Q6UWP2 260 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 C5orf56Q8N8D9 126 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 OR4D10Q8NGI6 311 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 PRSS22Q9GZN4 317 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 SLC5A7Q9GZV3 580 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
SCLT1-205ENST00000503401 RABL2BQ9UNT1 228 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
SCLT1-205ENST00000503401 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
SCLT1-205ENST00000503401 TNFSF12O43508 249 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 IGKV1-16P04430 117 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 DUTP33316 252 aaKnown RBP13.11□□□□□ -0.31
SCLT1-205ENST00000503401 MMDQ15546 238 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 ZNF79Q15937 498 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 PYDC2Q56P42 97 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 OR6F1Q8NGZ6 308 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 TAS2R8Q9NYW2 309 aa13.11□□□□□ -0.31
SCLT1-205ENST00000503401 M0QZK8 103 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 MC5RP33032 325 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 RPL30P62888 115 aaKnown RBP13.1□□□□□ -0.31
SCLT1-205ENST00000503401 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
SCLT1-205ENST00000503401 RNASE10Q5GAN6 216 aaKnown RBP13.1□□□□□ -0.31
SCLT1-205ENST00000503401 FAAP20Q6NZ36 180 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 LINC00299Q6ZSB3 139 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 Q8N9W7 124 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 TMEM229BQ8NBD8 167 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 OR2T6Q8NHC8 308 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 FXYD6Q9H0Q3 95 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 FGF16O43320 207 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 GSTZ1O43708 216 aaPredicted RBP13.1□□□□□ -0.31
SCLT1-205ENST00000503401 APOA2P02652 100 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 THBS3P49746 956 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 TAS2R19P59542 299 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 SRSF4Q08170 494 aaKnown RBP13.1□□□□□ -0.31
SCLT1-205ENST00000503401 ACTBL2Q562R1 376 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 OR2B11Q5JQS5 317 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 VAX1Q5SQQ9 334 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 ZNF818PQ6ZRF7 136 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 Q8N2B8 174 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 BVESQ8NE79 360 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 SERTAD4Q9NUC0 356 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
SCLT1-205ENST00000503401 SLC22A5O76082 557 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 IFNA6P05013 189 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 PROK1P58294 105 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-205ENST00000503401 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 PDPNQ86YL7 162 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 FAM71E2Q8N5Q1 922 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 DDB2Q92466 427 aa13.09□□□□□ -0.31
SCLT1-205ENST00000503401 A0A1B0GUS0 222 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 NBR2O15453 112 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 RAB3DO95716 219 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 CD74P04233 296 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 GNRHRP30968 328 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 SSBP1Q04837 148 aaKnown RBP13.08□□□□□ -0.32
SCLT1-205ENST00000503401 Q8N402 240 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 SPATA3Q8NHX4 192 aa13.08□□□□□ -0.32
SCLT1-205ENST00000503401 THAP7Q9BT49 309 aaPredicted RBP13.08□□□□□ -0.32
SCLT1-205ENST00000503401 LINC01548A6NM66 108 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 FCGR3BO75015 233 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 CSF1P09603 554 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 VSIG10L2P0DP72 767 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 ETV6P41212 452 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-205ENST00000503401 KRTAP10-3P60369 221 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 RPS16P62249 146 aaKnown RBP13.07□□□□□ -0.32
SCLT1-205ENST00000503401 HIST2H2BDQ6DRA6 164 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 OR8H1Q8NGG4 311 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 TCTEX1D2Q8WW35 142 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 WFDC12Q8WWY7 111 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 FLYWCH2Q96CP2 140 aaKnown RBP13.07□□□□□ -0.32
SCLT1-205ENST00000503401 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 RASL11BQ9BPW5 248 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 FBXL15Q9H469 300 aa13.07□□□□□ -0.32
SCLT1-205ENST00000503401 ANKRD20A5PA0PJZ0 165 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 CRYZL1O95825 349 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 TBPP20226 339 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 RTL8BQ17RB0 113 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 SCGB2B2Q4G0G5 96 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 AADACL3Q5VUY0 350 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 MFSD4AQ8N468 514 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 NPBQ8NG41 125 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 OR4C16Q8NGL9 310 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 HSD17B10Q99714 261 aaKnown RBP13.06□□□□□ -0.32
SCLT1-205ENST00000503401 HSPB9Q9BQS6 159 aa13.06□□□□□ -0.32
SCLT1-205ENST00000503401 SRRQ9GZT4 340 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms