RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SNX29P2Q8IUI4 249 aa14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 GIMAP1Q8WWP7 306 aa14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 DDB2Q92466 427 aa14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 NOL4LQ96MY1 436 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 HSPB9Q9BQS6 159 aa14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 EXTL2Q9UBQ6 330 aa14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-209ENST00000503346 PSMB11A5LHX3 300 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 RRHO14718 337 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 SPDEFO95238 335 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 AADACP22760 399 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 CD83Q01151 205 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 HIST2H2BDQ6DRA6 164 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 OVCH2Q7RTZ1 564 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 STPG2Q8N412 459 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 FLYWCH2Q96CP2 140 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 ZNF580Q9UK33 172 aa14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 RBMX2Q9Y388 322 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-209ENST00000503346 CTDSP2O14595 271 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 PPYP01298 95 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 IGF1P05019 195 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 RRASP10301 218 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 TAS2R46P59540 309 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 DYRK1AQ13627 763 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 PSG5Q15238 335 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 MSMO1Q15800 293 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 TCTEX1D4Q5JR98 221 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 LIN54Q6MZP7 749 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 C10orf99Q6UWK7 81 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 NDUFA11Q86Y39 141 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 OR4X2Q8NGF9 303 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 TSNAXQ99598 290 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 CITED2Q99967 270 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 SLIRPQ9GZT3 109 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 RBM38Q9H0Z9 239 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 LINC00527Q9UJ94 153 aa14.37□□□□□ -0.11
PDLIM7-209ENST00000503346 IGHV7-81A0A0B4J1V7 117 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 LINC00473A8K010 186 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 RGS5O15539 181 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 RCVRNP35243 200 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 LGALS7P47929 136 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 RPS16P62249 146 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 EIF4EBP1Q13541 118 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 RTL8BQ17RB0 113 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 ZNF660Q6AZW8 331 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 DHRS11Q6UWP2 260 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 TREML4Q6UXN2 200 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 LYSMD2Q8IV50 215 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 LAX1Q8IWV1 398 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 BVESQ8NE79 360 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 OR5H2Q8NGV7 314 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 C15orf40Q8WUR7 153 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 FBXL15Q9H469 300 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 EHFQ9NZC4 300 aa14.36□□□□□ -0.11
PDLIM7-209ENST00000503346 ADARB2-AS1A8MUL3 147 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 TSPAN15O95858 294 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 CSF1P09603 554 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 RFX2P48378 723 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 SLC35B1P78383 322 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 CBX3Q13185 183 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 TMEM177Q53S58 311 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 ZNF329Q86UD4 541 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 ABHD1Q96SE0 405 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 GON7Q9BXV9 100 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 MMP27Q9H306 513 aa14.35□□□□□ -0.11
PDLIM7-209ENST00000503346 FBN3Q75N90 2809 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 CCDC160A6NGH7 325 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 ZNF701M0R085 212 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 IGLV2-23P01705 113 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 PMP2P02689 132 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 OPN1MWP04001 364 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 OPN1MW2P0DN77 364 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 OPN1MW3P0DN78 364 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 HLA-DMAP28067 261 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 HRH1P35367 487 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 RPL30P62888 115 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 CFHR3Q02985 330 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 PLGLAQ15195 96 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 ZNF66Q6ZN08 573 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 COMMD1Q8N668 190 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 ZBTB34Q8NCN2 500 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 SECTM1Q8WVN6 248 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 HSD17B10Q99714 261 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 NXF2Q9GZY0 626 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 OR51J1Q9H342 316 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 CCL28Q9NRJ3 127 aa14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 METTL1Q9UBP6 276 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 RSL24D1Q9UHA3 163 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-209ENST00000503346 TCRBV4S1A1TA0A5B7 111 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 CRYGBP07316 175 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 NSUN5P1Q3KNT7 163 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 OR52I2Q8NH67 350 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 MOB3AQ96BX8 217 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 HARBI1Q96MB7 349 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 ZNF2Q9BSG1 426 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 C6orf62Q9GZU0 229 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 SLC5A7Q9GZV3 580 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 PRELID3BQ9Y3B1 194 aa14.33□□□□□ -0.12
PDLIM7-209ENST00000503346 TSSC4Q9Y5U2 329 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms