RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 RAB39BQ96DA2 213 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 PRELID3BQ9Y3B1 194 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 FAM90A26D6RGX4 464 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 TOR1AO14656 332 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 RBFOX2O43251 390 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPN13-205ENST00000502971 IGFBP2P18065 325 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 G6PCP35575 357 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 RAB40CQ96S21 281 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 KLF2Q9Y5W3 355 aaPredicted RBP18.09■□□□□ 0.49
PTPN13-205ENST00000502971 UBR5O95071 2799 aaPredicted RBP18.09■□□□□ 0.49
PTPN13-205ENST00000502971 TRBV23-1A0A0A0MS06 115 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 HPRT1P00492 218 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 KRASP01116 189 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 CAV2P51636 162 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 RPL7L1Q6DKI1 246 aaKnown RBP18.09■□□□□ 0.49
PTPN13-205ENST00000502971 ODF3L1Q8IXM7 274 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 MED9Q9NWA0 146 aa18.09■□□□□ 0.49
PTPN13-205ENST00000502971 SAA2-SAA4A0A096LPE2 208 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 FAM24AA6NFZ4 105 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 LEUTXA8MZ59 168 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 C19orf84I3L1E1 186 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 NXPH3O95157 252 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 SAA2P0DJI9 122 aaPredicted RBP18.08■□□□□ 0.48
PTPN13-205ENST00000502971 CCL3L1P16619 93 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 EWSR1Q01844 656 aaKnown RBP eCLIP18.08■□□□□ 0.48
PTPN13-205ENST00000502971 EIF5AL1Q6IS14 154 aaKnown RBP18.08■□□□□ 0.48
PTPN13-205ENST00000502971 LYG1Q8N1E2 194 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 LRRC20Q8TCA0 184 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 ADTRPQ96IZ2 230 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 S1PR3Q99500 378 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 DOPEY1Q5JWR5 2465 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 ARID1AO14497 2285 aa18.08■□□□□ 0.48
PTPN13-205ENST00000502971 A0A1W2PPE3 182 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 GPR37O15354 613 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 FCGR3BO75015 233 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 RRASP10301 218 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 THBS3P49746 956 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 GNG10P50151 68 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 LINC00205P59089 165 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 TMEM252Q8N6L7 170 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 DDB2Q92466 427 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 ZNF251Q9BRH9 671 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 SMIM3Q9BZL3 60 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 FLNCQ14315 2725 aa18.07■□□□□ 0.48
PTPN13-205ENST00000502971 BORCS7-ASMTA0A0B4J1R7 106 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 IGSF23A1L1A6 192 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 SYNGR2O43760 224 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 PAX9P55771 341 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 RPL23AP62750 156 aaKnown RBP18.06■□□□□ 0.48
PTPN13-205ENST00000502971 NHLH2Q02577 135 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 BAXQ07812 192 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 TMEM155Q4W5P6 130 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 MIDNQ504T8 468 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 FAM74A1Q5RGS3 127 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 H2BFWTQ7Z2G1 175 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 COMMD7Q86VX2 200 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 UBAC2Q8NBM4 344 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 CITED4Q96RK1 184 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.06■□□□□ 0.48
PTPN13-205ENST00000502971 WSB1Q9Y6I7 421 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 A0A1W2PPR1 153 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 TMEM50AO95807 157 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 ARHGDIBP52566 201 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 DLX6P56179 175 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 CLEC9AQ6UXN8 241 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 C1orf229Q6ZS94 237 aaPredicted RBP18.06■□□□□ 0.48
PTPN13-205ENST00000502971 C8orf31Q8N9H6 132 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 RAB1CQ92928 201 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 R3HDM4Q96D70 268 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 BSCL2Q96G97 398 aaPredicted RBP18.06■□□□□ 0.48
PTPN13-205ENST00000502971 TIMD4Q96H15 378 aa18.06■□□□□ 0.48
PTPN13-205ENST00000502971 MARCH11A6NNE9 402 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 FAM90A9PA6NNJ1 464 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 MED6O75586 246 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 TAS2R30P59541 319 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 ZNF841Q6ZN19 808 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 ARV1Q9H2C2 271 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 MIOXQ9UGB7 285 aa18.05■□□□□ 0.48
PTPN13-205ENST00000502971 FASNP49327 2511 aaKnown RBP18.05■□□□□ 0.48
PTPN13-205ENST00000502971 J3QKU1 62 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 PLA2G2AP14555 144 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 OR4S2Q8NH73 311 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 SMIM8Q96KF7 97 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 CXorf58Q96LI9 332 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 HSPB7Q9UBY9 170 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 PFDN2Q9UHV9 154 aa18.04■□□□□ 0.48
PTPN13-205ENST00000502971 USP9XQ93008 2570 aaPredicted RBP18.04■□□□□ 0.48
PTPN13-205ENST00000502971 ANKRD34BA5PLL1 514 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 A6NNC1 897 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 AVPI1Q5T686 147 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 RNF141Q8WVD5 230 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 TMED6Q8WW62 240 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 WFDC1Q9HC57 220 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 A0A087X0M5 115 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 A0A1B0GX30 115 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 GOSR1O95249 250 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 ERVFRD-1P60508 538 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 TNFRSF9Q07011 255 aa18.03■□□□□ 0.48
PTPN13-205ENST00000502971 SRSF1Q07955 248 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPN13-205ENST00000502971 ZNF295-AS1Q8N0V1 137 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms