RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SHISA3A0PJX4 238 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 FAM223BA6NKX1 122 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC17A2O00624 439 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 APOA2P02652 100 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 IGKV1-16P04430 117 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 ARSBP15848 533 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 PSMA1P25786 263 aaKnown RBP4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 PSMD7P51665 324 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 TMEM50BP56557 158 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 TPBGQ13641 420 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 P2RY14Q15391 338 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 HAGHQ16775 308 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 HSD17B12Q53GQ0 312 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 LAIR2Q6ISS4 152 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 GTSCR1Q86UQ5 136 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 FAM223AQ8IWN6 122 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 C8orf59Q8N0T1 100 aaPredicted RBP4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 ZFP41Q8N8Y5 198 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 TEX45Q8NA69 505 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 IL1F10Q8WWZ1 152 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 ABHD14BQ96IU4 210 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 CABLES2Q9BTV7 478 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 PEMTQ9UBM1 199 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 PEF1Q9UBV8 284 aaKnown RBP4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 ZNF221Q9UK13 617 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 TNCP24821 2201 aa4.65□□□□□ -1.67
LSM3P4-201ENST00000502948 TRBV6-7A0A0A0MS04 114 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 A0A0A6YYD4 124 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 TRBV9A0A0B4J1U6 114 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 TRDCB7Z8K6 153 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 LGALS9O00182 355 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 CASQ2O14958 399 aaPredicted RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 CREBL2O60519 120 aaPredicted RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 ARL6IP5O75915 188 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 IGHV3-11P01762 117 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 CSN3P07498 182 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 MAP2K4P45985 399 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 UBE2KP61086 200 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 RPS16P62249 146 aaKnown RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 SPHARQ15513 63 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 MRGPRG-AS1Q2M3A8 158 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 RBM48Q5RL73 367 aaKnown RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 OR10K2Q6IF99 312 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 GLDNQ6ZMI3 551 aaPredicted RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 OR56B1Q8NGI3 324 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 OSR1Q8TAX0 266 aaPredicted RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 DDB2Q92466 427 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 SNAPC3Q92966 411 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 KCTD12Q96CX2 325 aaKnown RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 RBMXL1Q96E39 390 aaKnown RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 ADTRPQ96IZ2 230 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 MS4A10Q96PG2 267 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 NICN1Q9BSH3 213 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 FAM103A1Q9BTL3 118 aaKnown RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 CHMP1AQ9HD42 196 aaPredicted RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 ZC4H2Q9NQZ6 224 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 RDH8Q9NYR8 311 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 AK3Q9UIJ7 227 aa4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 LSM2Q9Y333 95 aaKnown RBP4.64□□□□□ -1.67
LSM3P4-201ENST00000502948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 IGKV1-6A0A0C4DH72 117 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SOCS1O15524 211 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC25A17O43808 307 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC22A5O76082 557 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 JTBO76095 146 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 CNIH1O95406 144 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SCTP09683 121 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 OR9G9P0C7N8 305 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 CBX3Q13185 183 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 DYRK1AQ13627 763 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 IRF3Q14653 427 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 ARL6IP1Q15041 203 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 RTL8BQ17RB0 113 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 RPEL1Q2QD12 228 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 AHSA2Q719I0 299 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 C5orf24Q7Z6I8 188 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 TTC9CQ8N5M4 171 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 ADAD2Q8NCV1 583 aaKnown RBP4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 ABHD5Q8WTS1 349 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 CASTOR1Q8WTX7 329 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SPIN2AQ99865 258 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SPIN2BQ9BPZ2 258 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 CMSS1Q9BQ75 279 aaKnown RBP4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 PECRQ9BY49 303 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 PARP12Q9H0J9 701 aaKnown RBP4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 HIPK2Q9H2X6 1198 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC35D1Q9NTN3 355 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SDHAF2Q9NX18 166 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC2A8Q9NY64 477 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 TECRQ9NZ01 308 aaKnown RBP4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 OR1A1Q9P1Q5 309 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 CEPT1Q9Y6K0 416 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 A3GALT2U3KPV4 340 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 HYDINQ4G0P3 5121 aa4.63□□□□□ -1.67
LSM3P4-201ENST00000502948 A0A0B4J203 849 aa4.62□□□□□ -1.67
LSM3P4-201ENST00000502948 PNMA8CA0A1B0GUJ8 204 aa4.62□□□□□ -1.67
LSM3P4-201ENST00000502948 SRRM4A7MD48 611 aaKnown RBP4.62□□□□□ -1.67
LSM3P4-201ENST00000502948 A8MWP6 167 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms