RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 FAM90A2PQ658T7 463 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 IGFL3Q6UXB1 125 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 SNX22Q96L94 193 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 METTL1Q9UBP6 276 aaKnown RBP13.81□□□□□ -0.2
VCAN-204ENST00000502527 IGKV1D-17A0A075B6S4 117 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 A0A1W2PPE3 182 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 ZG16O60844 167 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 IGHV3-13P01766 116 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 MBP02144 154 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 GPR12P47775 334 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 TIMM23BQ5SRD1 257 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 FAM180AQ6UWF9 173 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 RBMS3Q6XE24 437 aaKnown RBP13.8□□□□□ -0.2
VCAN-204ENST00000502527 LRP11Q86VZ4 500 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 GNG12Q9UBI6 72 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 JPT1Q9UK76 154 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 GTF3C1Q12789 2109 aa13.8□□□□□ -0.2
VCAN-204ENST00000502527 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 PMS2P5A8MQ11 134 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 CEBPZOSA8MTT3 80 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 M0R1B8 84 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 S100A8P05109 93 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 CD55P08174 381 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 LTC4SQ16873 150 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 MSMPQ1L6U9 139 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
VCAN-204ENST00000502527 CA5BP1Q8WTZ4 195 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 LHX4Q969G2 390 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 OTOGLQ3ZCN5 2332 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 IGHV2-5P01817 119 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 CRYAAP02489 173 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 CR1LQ2VPA4 569 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 ALKBH2Q6NS38 261 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 ZDHHC16Q969W1 377 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 S100PBPQ96BU1 408 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 R3HDM4Q96D70 268 aa13.79□□□□□ -0.2
VCAN-204ENST00000502527 YPEL1O60688 119 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 LY86O95711 162 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 FGF7P21781 194 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 DUTP33316 252 aaKnown RBP13.78□□□□□ -0.2
VCAN-204ENST00000502527 RPS10P46783 165 aaKnown RBP13.78□□□□□ -0.2
VCAN-204ENST00000502527 KLF3P57682 345 aaPredicted RBP13.78□□□□□ -0.2
VCAN-204ENST00000502527 LINC00205P59089 165 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 FABP9Q0Z7S8 132 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 ELOBQ15370 118 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 C3orf36Q3SXR2 165 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 MORN2Q502X0 79 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 NCR3LG1Q68D85 454 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 ZNF474Q6S9Z5 364 aaPredicted RBP13.78□□□□□ -0.2
VCAN-204ENST00000502527 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 YPEL2Q96QA6 119 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 OR2V2Q96R30 315 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 FAM90A9PA6NNJ1 464 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 GLRXP35754 106 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 GNB2P62879 340 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 VWC2Q2TAL6 325 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 MEGF10Q96KG7 1140 aa13.78□□□□□ -0.2
VCAN-204ENST00000502527 AP4M1O00189 453 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 ATXN7O15265 892 aaPredicted RBP13.77□□□□□ -0.21
VCAN-204ENST00000502527 HPRT1P00492 218 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 IGKV1D-33P01593 117 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 IGKV1-33P01594 117 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 ACSM6Q6P461 480 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 MOGAT3Q86VF5 341 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 ZNF709Q8N972 641 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 Q8WTZ3 238 aa13.77□□□□□ -0.21
VCAN-204ENST00000502527 IGHV3OR15-7A0A075B7D8 119 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 CTXND1A0A1B0GTU2 59 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 FCGR3BO75015 233 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 S100A9P06702 114 aaKnown RBP13.76□□□□□ -0.21
VCAN-204ENST00000502527 AARDQ4LEZ3 155 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 TCEAL7Q9BRU2 100 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 QTRT1Q9BXR0 403 aaKnown RBP13.76□□□□□ -0.21
VCAN-204ENST00000502527 TMEM242Q9NWH2 141 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 FAM215AQ9Y5M1 114 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 F2RL2O00254 374 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 PROP1O75360 226 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 SMIM6P0DI80 62 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 NKX6-1P78426 367 aaPredicted RBP13.76□□□□□ -0.21
VCAN-204ENST00000502527 HNF4GQ14541 408 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 FFAR4Q5NUL3 377 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 Q6ZS92 163 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 ACTR3CQ9C0K3 210 aaPredicted RBP13.76□□□□□ -0.21
VCAN-204ENST00000502527 SDF2L1Q9HCN8 221 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 OR6C3Q9NZP0 311 aa13.76□□□□□ -0.21
VCAN-204ENST00000502527 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 EP300Q09472 2414 aaPredicted RBP13.75□□□□□ -0.21
VCAN-204ENST00000502527 C17orf112F2Z3M2 114 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 M0R1X1 148 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.21
VCAN-204ENST00000502527 LHBP01229 141 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 NQO2P16083 231 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 ERVFRD-1P60508 538 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 MEF2BQ02080 365 aaPredicted RBP13.75□□□□□ -0.21
VCAN-204ENST00000502527 SPINK9Q5DT21 86 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms