RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 OR6F1Q8NGZ6 308 aa12.38□□□□□ -0.43
CPNE1-228ENST00000498814 RBMXL1Q96E39 390 aaKnown RBP12.38□□□□□ -0.43
CPNE1-228ENST00000498814 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
CPNE1-228ENST00000498814 ZNF107Q9UII5 783 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-228ENST00000498814 RBMX2Q9Y388 322 aaKnown RBP12.38□□□□□ -0.43
CPNE1-228ENST00000498814 NCBP2LA6PVI3 153 aaKnown RBP12.37□□□□□ -0.43
CPNE1-228ENST00000498814 H7C2Y5 167 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 GSTZ1O43708 216 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-228ENST00000498814 APOA2P02652 100 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 DUTP33316 252 aaKnown RBP12.37□□□□□ -0.43
CPNE1-228ENST00000498814 F2RL1P55085 397 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 HERV-K104P61576 105 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 CCDC190Q86UF4 302 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 PDPNQ86YL7 162 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 C3orf56Q8N813 242 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 Q8N9W7 124 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 TMEM229BQ8NBD8 167 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 OR6Q1Q8NGQ2 317 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 RITA1Q96K30 269 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 RNF5Q99942 180 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-228ENST00000498814 ZNF747Q9BV97 191 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 SIGLEC9Q9Y336 463 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 V9GYH0 126 aa12.37□□□□□ -0.43
CPNE1-228ENST00000498814 PTBP1P26599 531 aaKnown RBP eCLIP12.36□□□□□ -0.43
CPNE1-228ENST00000498814 ETV6P41212 452 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 FXYD4P59646 89 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 FAM71E2Q8N5Q1 922 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 NPBQ8NG41 125 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 SECTM1Q8WVN6 248 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 DDB2Q92466 427 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 MOB3AQ96BX8 217 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 HSD17B10Q99714 261 aaKnown RBP12.36□□□□□ -0.43
CPNE1-228ENST00000498814 SLC5A7Q9GZV3 580 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 CCL28Q9NRJ3 127 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 SERTAD4Q9NUC0 356 aa12.36□□□□□ -0.43
CPNE1-228ENST00000498814 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
CPNE1-228ENST00000498814 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-228ENST00000498814 LINC00473A8K010 186 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 M0QYG6 137 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 NBR2O15453 112 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 CD74P04233 296 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 CD3DP04234 171 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 RRASP10301 218 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 TAS2R19P59542 299 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 TSPAN5P62079 268 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 EIF4EBP1Q13541 118 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-228ENST00000498814 MMDQ15546 238 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 RNASE10Q5GAN6 216 aaKnown RBP12.35□□□□□ -0.43
CPNE1-228ENST00000498814 ZNF66Q6ZN08 573 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 WFDC12Q8WWY7 111 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
CPNE1-228ENST00000498814 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 TAS2R8Q9NYW2 309 aa12.35□□□□□ -0.43
CPNE1-228ENST00000498814 HAX1O00165 279 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 NDUFA3O95167 84 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 IFNA6P05013 189 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 CSF1P09603 554 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 CNTFRP26992 372 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-228ENST00000498814 CBX3Q13185 183 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 ARSJQ5FYB0 599 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-228ENST00000498814 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 SPANXN2Q5MJ10 180 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 STEAP1BQ6NZ63 245 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 BVESQ8NE79 360 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 TINAGL1Q9GZM7 467 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-228ENST00000498814 PRELID3BQ9Y3B1 194 aa12.34□□□□□ -0.43
CPNE1-228ENST00000498814 RAB3DO95716 219 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 IGHG2P01859 326 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 GNRHRP30968 328 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 LGALS7P47929 136 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
CPNE1-228ENST00000498814 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
CPNE1-228ENST00000498814 ZNF79Q15937 498 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 C5orf64Q2M2E5 130 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 TMEM177Q53S58 311 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 ZNF818PQ6ZRF7 136 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 MFSD4AQ8N468 514 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 TSNAXQ99598 290 aaKnown RBP12.33□□□□□ -0.44
CPNE1-228ENST00000498814 THAP7Q9BT49 309 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-228ENST00000498814 WNT10AQ9GZT5 417 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 FXYD6Q9H0Q3 95 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 DNHD1Q96M86 4753 aa12.33□□□□□ -0.44
CPNE1-228ENST00000498814 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 ANK2Q01484 3957 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 RRHO14718 337 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 SPDEFO95238 335 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms