RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 OR10K2Q6IF99 312 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 RPL22L1Q6P5R6 122 aaKnown RBP6.82□□□□□ -1.32
CCDC171-209ENST00000498725 C6orf201Q7Z4U5 140 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF554Q86TJ5 538 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 ZFP41Q8N8Y5 198 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 PHLDA1Q8WV24 401 aaPredicted RBP6.82□□□□□ -1.32
CCDC171-209ENST00000498725 THRSPQ92748 146 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 USMG5Q96IX5 58 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 NEDD4LQ96PU5 975 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 OR14A2Q96R54 314 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 RNF5Q99942 180 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 C11orf54Q9H0W9 315 aaPredicted RBP6.82□□□□□ -1.32
CCDC171-209ENST00000498725 AKIP1Q9NQ31 210 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 SLC35D1Q9NTN3 355 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 LRRC42Q9Y546 428 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 PNMA8CA0A1B0GUJ8 204 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 FAM90A7PA6NKC0 464 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 M0R1X1 148 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 PROP1O75360 226 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 TUSC2O75896 110 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 NDUFB8O95169 186 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 OR2C1O95371 312 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 LIMS3P0CW19 117 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 LIMS4P0CW20 117 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 ETV1P50549 477 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 TAGLNQ01995 201 aaKnown RBP6.81□□□□□ -1.32
CCDC171-209ENST00000498725 TNFRSF9Q07011 255 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 SLC25A30Q5SVS4 291 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 PDPNQ86YL7 162 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 TMEM61Q8N0U2 210 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 KCNG3Q8TAE7 436 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 ACOT12Q8WYK0 555 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 SLC7A6OSQ96CW6 309 aaPredicted RBP6.81□□□□□ -1.32
CCDC171-209ENST00000498725 HARBI1Q96MB7 349 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 HDHD3Q9BSH5 251 aaPredicted RBP6.81□□□□□ -1.32
CCDC171-209ENST00000498725 KCNK15Q9H427 330 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 UBQLN2Q9UHD9 624 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 GMPPBQ9Y5P6 360 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 S4R3C0 116 aa6.81□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF320A2RRD8 509 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 DYNC1I1O14576 645 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 EI24O14681 340 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 SHOXO15266 292 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 OR2J3O76001 311 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 LALBAP00709 142 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 IGLV2-23P01705 113 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 OR9G9P0C7N8 305 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 FCGR1AP12314 374 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 CAPGP40121 348 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF45Q02386 682 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 Q499Y3 187 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 TM4SF20Q53R12 229 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF57Q68EA5 555 aaPredicted RBP6.8□□□□□ -1.32
CCDC171-209ENST00000498725 IDO2Q6ZQW0 420 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 ADAD2Q8NCV1 583 aaKnown RBP6.8□□□□□ -1.32
CCDC171-209ENST00000498725 CENPNQ96H22 339 aaPredicted RBP6.8□□□□□ -1.32
CCDC171-209ENST00000498725 AGMATQ9BSE5 352 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 ZC4H2Q9NQZ6 224 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
CCDC171-209ENST00000498725 FBXL17Q9UF56 701 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 MLXQ9UH92 298 aa6.8□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF230Q9UIE0 474 aaPredicted RBP6.8□□□□□ -1.32
CCDC171-209ENST00000498725 TRBV5-5A0A0J9YX44 114 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 FAM223BA6NKX1 122 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 OGG1O15527 345 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 XRCC3O43542 346 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 ALPLP05186 524 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 CRYGBP07316 175 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 SCTP09683 121 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 RPL35AP18077 110 aaKnown RBP6.79□□□□□ -1.32
CCDC171-209ENST00000498725 GABRB1P18505 474 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 CBLN1P23435 193 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 ZBTB25P24278 435 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 BMI1P35226 326 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 SMN1Q16637 294 aaKnown RBP6.79□□□□□ -1.32
CCDC171-209ENST00000498725 CCDC58Q4VC31 144 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 C1orf146Q5VVC0 180 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 BTNL8Q6UX41 500 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 TMPRSS11AQ6ZMR5 421 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 C19orf35Q6ZS72 473 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 FAM223AQ8IWN6 122 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 UXS1Q8NBZ7 420 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 EDARADDQ8WWZ3 215 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 SMIM19Q96E16 107 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 Q96MT0 163 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 NICN1Q9BSH3 213 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
CCDC171-209ENST00000498725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 SRRM4A7MD48 611 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 GGCTO75223 188 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 HTR2CP28335 458 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 APOC4P55056 127 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 NANOS2P60321 138 aaKnown RBP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 RPS11P62280 158 aaKnown RBP eCLIP6.78□□□□□ -1.32
CCDC171-209ENST00000498725 HLA-DRB3P79483 266 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 CBX3Q13185 183 aa6.78□□□□□ -1.32
CCDC171-209ENST00000498725 C15orf32Q32M92 178 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms