RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 AVPI1Q5T686 147 aa21.44■■□□□ 1.02
HOXB3-212ENST00000498678 FAM71E2Q8N5Q1 922 aa21.44■■□□□ 1.02
HOXB3-212ENST00000498678 ZNF439Q8NDP4 499 aa21.44■■□□□ 1.02
HOXB3-212ENST00000498678 ZNF714Q96N38 554 aa21.44■■□□□ 1.02
HOXB3-212ENST00000498678 HSD17B10Q99714 261 aaKnown RBP21.44■■□□□ 1.02
HOXB3-212ENST00000498678 ABHD14AQ9BUJ0 271 aa21.44■■□□□ 1.02
HOXB3-212ENST00000498678 ERVFRD-1P60508 538 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 SMCO1Q147U7 214 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 HSD17B13Q7Z5P4 300 aaPredicted RBP21.43■■□□□ 1.02
HOXB3-212ENST00000498678 TCTEX1D2Q8WW35 142 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 GPR146Q96CH1 333 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 MSGN1A6NI15 193 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 LINC00473A8K010 186 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 RAMP3O60896 148 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 FGF2P09038 288 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 LPAR6P43657 344 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 RAB7AP51149 207 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 LINC00205P59089 165 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 STX12Q86Y82 276 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 OR10A7Q8NGE5 316 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 PFDN2Q9UHV9 154 aa21.43■■□□□ 1.02
HOXB3-212ENST00000498678 A0A1W2PPE3 182 aa21.42■■□□□ 1.02
HOXB3-212ENST00000498678 C17orf98A8MV24 154 aa21.42■■□□□ 1.02
HOXB3-212ENST00000498678 ZNF841Q6ZN19 808 aa21.42■■□□□ 1.02
HOXB3-212ENST00000498678 LSM10Q969L4 123 aaKnown RBP21.42■■□□□ 1.02
HOXB3-212ENST00000498678 ZNF251Q9BRH9 671 aa21.42■■□□□ 1.02
HOXB3-212ENST00000498678 ZFP57Q9NU63 452 aa21.42■■□□□ 1.02
HOXB3-212ENST00000498678 GAB2Q9UQC2 676 aa21.42■■□□□ 1.02
HOXB3-212ENST00000498678 NUPL2O15504 423 aaKnown RBP21.41■■□□□ 1.02
HOXB3-212ENST00000498678 ST8SIA3O43173 380 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 IGKV1-5P01602 117 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 OR2B11Q5JQS5 317 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 HEPN1Q6WQI6 88 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 AQP10Q96PS8 301 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 MLXQ9UH92 298 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 DUTP33316 252 aaKnown RBP21.41■■□□□ 1.02
HOXB3-212ENST00000498678 CDKN1AP38936 164 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 RPL39P5Q59GN2 51 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 SPAG16Q8N0X2 631 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 TCTEX1D1Q8N7M0 179 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 FAM212BQ9NTI7 297 aaPredicted RBP21.41■■□□□ 1.02
HOXB3-212ENST00000498678 POMT1Q9Y6A1 747 aa21.41■■□□□ 1.02
HOXB3-212ENST00000498678 KANTRA0A1W2PQU2 76 aa21.4■■□□□ 1.02
HOXB3-212ENST00000498678 BCL2L11O43521 198 aa21.4■■□□□ 1.02
HOXB3-212ENST00000498678 SMIM6P0DI80 62 aa21.4■■□□□ 1.02
HOXB3-212ENST00000498678 MS4A7Q9GZW8 240 aaPredicted RBP21.4■■□□□ 1.02
HOXB3-212ENST00000498678 EPG5Q9HCE0 2579 aa21.4■■□□□ 1.02
HOXB3-212ENST00000498678 SLC25A6P12236 298 aa21.4■■□□□ 1.02
HOXB3-212ENST00000498678 C1orf229Q6ZS94 237 aaPredicted RBP21.4■■□□□ 1.02
HOXB3-212ENST00000498678 GSN-AS1Q9NRJ2 163 aa21.4■■□□□ 1.02
HOXB3-212ENST00000498678 A0A1B0GU03 582 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 PPIHO43447 177 aaKnown RBP21.39■■□□□ 1.01
HOXB3-212ENST00000498678 EPHA1P21709 976 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 NKX2-1P43699 371 aaPredicted RBP21.39■■□□□ 1.01
HOXB3-212ENST00000498678 IZUMO4Q1ZYL8 232 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 CXorf66Q5JRM2 361 aaPredicted RBP21.39■■□□□ 1.01
HOXB3-212ENST00000498678 NCR3LG1Q68D85 454 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 Q6ZRM9 215 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 ODF3L1Q8IXM7 274 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 RNASE11Q8TAA1 199 aaKnown RBP21.39■■□□□ 1.01
HOXB3-212ENST00000498678 RAB1CQ92928 201 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 USF3Q68DE3 2245 aa21.39■■□□□ 1.01
HOXB3-212ENST00000498678 YLPM1P49750 1951 aaKnown RBP21.39■■□□□ 1.01
HOXB3-212ENST00000498678 M0R1X1 148 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 PITX3O75364 302 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 HKR1P10072 659 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 GNG10P50151 68 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 AKR1C2P52895 323 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 DLX6P56179 175 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 ZNF816Q0VGE8 651 aaPredicted RBP21.38■■□□□ 1.01
HOXB3-212ENST00000498678 TMEM155Q4W5P6 130 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 TIMD4Q96H15 378 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 RCL1Q9Y2P8 373 aaKnown RBP21.38■■□□□ 1.01
HOXB3-212ENST00000498678 E5RGE8 158 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 WRBO00258 174 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 ID3Q02535 119 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 SLC25A48Q6ZT89 311 aaKnown RBP21.38■■□□□ 1.01
HOXB3-212ENST00000498678 DMBX1Q8NFW5 382 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 CHODLQ9H9P2 273 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 NSG2Q9Y328 171 aa21.38■■□□□ 1.01
HOXB3-212ENST00000498678 TRBV23-1A0A0A0MS06 115 aa21.37■■□□□ 1.01
HOXB3-212ENST00000498678 S100PP25815 95 aa21.37■■□□□ 1.01
HOXB3-212ENST00000498678 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.37■■□□□ 1.01
HOXB3-212ENST00000498678 SAA2-SAA4A0A096LPE2 208 aa21.37■■□□□ 1.01
HOXB3-212ENST00000498678 RAB29O14966 203 aa21.37■■□□□ 1.01
HOXB3-212ENST00000498678 S1PR2O95136 353 aa21.37■■□□□ 1.01
HOXB3-212ENST00000498678 SAA2P0DJI9 122 aaPredicted RBP21.37■■□□□ 1.01
HOXB3-212ENST00000498678 MIOXQ9UGB7 285 aa21.37■■□□□ 1.01
HOXB3-212ENST00000498678 NDUFS7O75251 213 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 GOSR1O95249 250 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 S100A8P05109 93 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 RPL12P30050 165 aaKnown RBP21.36■■□□□ 1.01
HOXB3-212ENST00000498678 LYG1Q8N1E2 194 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 C11orf1Q9H5F2 150 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 DOPEY1Q5JWR5 2465 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 DCHS2Q6V1P9 2916 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 F12P00748 615 aaPredicted RBP21.36■■□□□ 1.01
HOXB3-212ENST00000498678 TMEM33P57088 247 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 PLEKHA2Q9HB19 425 aa21.36■■□□□ 1.01
HOXB3-212ENST00000498678 CACNG5Q9UF02 275 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms