RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 IGKV1-16P04430 117 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 IGF1P05019 195 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 OR5H8P0DN80 308 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 RRASP10301 218 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 PRSS3P35030 304 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 TAS2R20P59543 309 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 PSG5Q15238 335 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 ZNF660Q6AZW8 331 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-213ENST00000498495 ZNF645Q8N7E2 425 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 BVESQ8NE79 360 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 AP3S1Q92572 193 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 CLCC1Q96S66 551 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 IFT46Q9NQC8 304 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 NECAP2Q9NVZ3 263 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 METTL1Q9UBP6 276 aaKnown RBP10.07□□□□□ -0.8
HSPG2-213ENST00000498495 MRPS7Q9Y2R9 242 aaKnown RBP10.07□□□□□ -0.8
HSPG2-213ENST00000498495 FBN3Q75N90 2809 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 FCN1O00602 326 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 HPGDSO60760 199 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 TUSC2O75896 110 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 EIF4EP06730 217 aaKnown RBP10.06□□□□□ -0.8
HSPG2-213ENST00000498495 ELANEP08246 267 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 ZNF182P17025 639 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-213ENST00000498495 FCGR2CP31995 323 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 DUTP33316 252 aaKnown RBP10.06□□□□□ -0.8
HSPG2-213ENST00000498495 LGALS7P47929 136 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 RTL8BQ17RB0 113 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 CXorf66Q5JRM2 361 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-213ENST00000498495 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-213ENST00000498495 C5orf30Q96GV9 206 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 PARP11Q9NR21 331 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 WSB1Q9Y6I7 421 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 TRRAPQ9Y4A5 3859 aa10.06□□□□□ -0.8
HSPG2-213ENST00000498495 NUDT19A8MXV4 375 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 FAM25AB3EWG3 89 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 FAM25CB3EWG5 89 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 FAM25GB3EWG6 89 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 SHOXO15266 292 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 ATP6V0E1O15342 81 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 SPDEFO95238 335 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 PF4P02776 101 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 ELK1P19419 428 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 RPL5P46777 297 aaKnown RBP10.05□□□□□ -0.8
HSPG2-213ENST00000498495 RPL23AP62750 156 aaKnown RBP10.05□□□□□ -0.8
HSPG2-213ENST00000498495 CX3CL1P78423 397 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 TMEM267Q0VDI3 215 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-213ENST00000498495 FOXE3Q13461 319 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 OR5AP2Q8NGF4 316 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 ABHD5Q8WTS1 349 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 ZNF580Q9UK33 172 aa10.05□□□□□ -0.8
HSPG2-213ENST00000498495 RBMX2Q9Y388 322 aaKnown RBP10.05□□□□□ -0.8
HSPG2-213ENST00000498495 TRAV41A0A0B4J266 112 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 IGKV1D-13A0A0B4J2D9 117 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 LINC00473A8K010 186 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 G3V318 75 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 SLC25A17O43808 307 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 IGHG4P01861 327 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 RPLP1P05386 114 aaKnown RBP10.04□□□□□ -0.8
HSPG2-213ENST00000498495 IGKV1-13P0DP09 117 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 AADACP22760 399 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 CFHR3Q02985 330 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 CDK10Q15131 360 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 TMEM177Q53S58 311 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 TMEM65Q6PI78 240 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 SECTM1Q8WVN6 248 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 GIMAP1Q8WWP7 306 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 SNAPC3Q92966 411 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 HARBI1Q96MB7 349 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 DCUN1D5Q9BTE7 237 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 PRELID3BQ9Y3B1 194 aa10.04□□□□□ -0.8
HSPG2-213ENST00000498495 FCGR3BO75015 233 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 CRYZL1O95825 349 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 CA2P00918 260 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 PPYP01298 95 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 CD33P20138 364 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 PPIFP30405 207 aaKnown RBP10.03□□□□□ -0.8
HSPG2-213ENST00000498495 SLC6A1P30531 599 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 RFX2P48378 723 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 TMBIM6P55061 237 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 DEFA6Q01524 100 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 ECSCRQ19T08 205 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 LCNL1Q6ZST4 164 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 KCTD9Q7L273 389 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 PPP1R27Q86WC6 154 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 SNX29P2Q8IUI4 249 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 KLHL30-AS1Q8NEE0 82 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 DDB2Q92466 427 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 HSD17B10Q99714 261 aaKnown RBP10.03□□□□□ -0.8
HSPG2-213ENST00000498495 CCL28Q9NRJ3 127 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 EHFQ9NZC4 300 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 NUBP2Q9Y5Y2 271 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 A3GALT2U3KPV4 340 aa10.03□□□□□ -0.8
HSPG2-213ENST00000498495 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
HSPG2-213ENST00000498495 NOL3O60936 208 aaKnown RBP10.02□□□□□ -0.81
HSPG2-213ENST00000498495 CNIH1O95406 144 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms