RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 DEFB114Q30KQ6 69 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
CCDC58-207ENST00000498466 NKAIN3Q8N8D7 197 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 APH1BQ8WW43 257 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 UQCC2Q9BRT2 126 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 SLC35D1Q9NTN3 355 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 ZNF221Q9UK13 617 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 HECTD4Q9Y4D8 3996 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 PNMA8CA0A1B0GUJ8 204 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 LOC100130705A0A1B0GUX0 176 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 BMPR1BO00238 502 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 DYNC1I1O14576 645 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 RBMXL2O75526 392 aaKnown RBP10.48□□□□□ -0.73
CCDC58-207ENST00000498466 NAPSAO96009 420 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 RASSF2P50749 326 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 OR10K2Q6IF99 312 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 ZNF880Q6PDB4 577 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 MOB1BQ7L9L4 216 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 SLC16A13Q7RTY0 426 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
CCDC58-207ENST00000498466 PGLYRP3Q96LB9 341 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 SLC29A1Q99808 456 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
CCDC58-207ENST00000498466 M0R1X1 148 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 CIB2O75838 187 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
CCDC58-207ENST00000498466 CEMP1Q6PRD7 247 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-207ENST00000498466 HARBI1Q96MB7 349 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 DERL3Q96Q80 235 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 TMEM59Q9BXS4 323 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 CLEC2DQ9UHP7 191 aa10.47□□□□□ -0.73
CCDC58-207ENST00000498466 EXOSC1Q9Y3B2 195 aaKnown RBP10.47□□□□□ -0.73
CCDC58-207ENST00000498466 A0A0J9YWU9 116 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 IRGMA1A4Y4 181 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 MSGN1A6NI15 193 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 MPPED1O15442 326 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 TUSC2O75896 110 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 CRYGBP07316 175 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 OR9G9P0C7N8 305 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 UBBP0CG47 229 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 FOLR2P14207 255 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 EDN2P20800 178 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 HTR2CP28335 458 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 KIR2DS2P43631 304 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 RPS27AP62979 156 aaKnown RBP10.46□□□□□ -0.73
CCDC58-207ENST00000498466 HLA-DRB3P79483 266 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 RHOGP84095 191 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 ATP5G2Q06055 141 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 ADAD2Q8NCV1 583 aaKnown RBP10.46□□□□□ -0.73
CCDC58-207ENST00000498466 THRSPQ92748 146 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 PTX4Q96A99 478 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 NICN1Q9BSH3 213 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 AKIP1Q9NQ31 210 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 ZC4H2Q9NQZ6 224 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 PLEKHJ1Q9NW61 149 aa10.46□□□□□ -0.73
CCDC58-207ENST00000498466 TECRQ9NZ01 308 aaKnown RBP10.46□□□□□ -0.73
CCDC58-207ENST00000498466 ZNF230Q9UIE0 474 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-207ENST00000498466 DIMT1Q9UNQ2 313 aaKnown RBP10.46□□□□□ -0.73
CCDC58-207ENST00000498466 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-207ENST00000498466 LOC102724200A0A096LPH7 203 aaPredicted RBP10.45□□□□□ -0.74
CCDC58-207ENST00000498466 C2orf70A6NJV1 201 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 FAM223BA6NKX1 122 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 SHOXO15266 292 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 WBP4O75554 376 aaKnown RBP10.45□□□□□ -0.74
CCDC58-207ENST00000498466 DEDDO75618 318 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 PRH1P02810 166 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 SCTP09683 121 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 EWSR1Q01844 656 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCDC58-207ENST00000498466 CBX3Q13185 183 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 MED21Q13503 144 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 FAM223AQ8IWN6 122 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 HDHD3Q9BSH5 251 aaPredicted RBP10.45□□□□□ -0.74
CCDC58-207ENST00000498466 RIMS4Q9H426 269 aaPredicted RBP10.45□□□□□ -0.74
CCDC58-207ENST00000498466 SELENOKQ9Y6D0 94 aa10.45□□□□□ -0.74
CCDC58-207ENST00000498466 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.44□□□□□ -0.74
CCDC58-207ENST00000498466 TRBV6-6A0A0A6YYG2 114 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 NDUFB8O95169 186 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 TNXAQ16473 311 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 OR52B4Q8NGK2 314 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 KCNG3Q8TAE7 436 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 C9orf16Q9BUW7 83 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 TM2D1Q9BX74 207 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 KCNK15Q9H427 330 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 RDH8Q9NYR8 311 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 AK3Q9UIJ7 227 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 MGAT4AQ9UM21 535 aa10.44□□□□□ -0.74
CCDC58-207ENST00000498466 SRRM4A7MD48 611 aaKnown RBP10.43□□□□□ -0.74
CCDC58-207ENST00000498466 PPP5D1E7EU14 171 aa10.43□□□□□ -0.74
CCDC58-207ENST00000498466 HLA-AP01891 365 aaKnown RBP10.43□□□□□ -0.74
CCDC58-207ENST00000498466 MAPK3P27361 379 aaPredicted RBP10.43□□□□□ -0.74
CCDC58-207ENST00000498466 TAS2R43P59537 309 aa10.43□□□□□ -0.74
CCDC58-207ENST00000498466 ZNF45Q02386 682 aa10.43□□□□□ -0.74
CCDC58-207ENST00000498466 TNFRSF9Q07011 255 aa10.43□□□□□ -0.74
CCDC58-207ENST00000498466 LYG2Q86SG7 212 aa10.43□□□□□ -0.74
CCDC58-207ENST00000498466 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.43□□□□□ -0.74
CCDC58-207ENST00000498466 SRSF12Q8WXF0 261 aaKnown RBP10.43□□□□□ -0.74
CCDC58-207ENST00000498466 CACNG8Q8WXS5 425 aa10.43□□□□□ -0.74
CCDC58-207ENST00000498466 ACOT12Q8WYK0 555 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms