RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZP3P21754 424 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 SSBP2P81877 361 aaPredicted RBP12.22□□□□□ -0.45
MUC1-220ENST00000498431 CEACAM19Q7Z692 300 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 DRAXINQ8NBI3 349 aaPredicted RBP12.22□□□□□ -0.45
MUC1-220ENST00000498431 OR5AN1Q8NGI8 311 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 OR9G4Q8NGQ1 327 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 GRPEL2Q8TAA5 225 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 PHYHIPQ92561 330 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 DERL3Q96Q80 235 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 AGMATQ9BSE5 352 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 FAAP24Q9BTP7 215 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 ZNF355PQ9NSJ1 428 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 STEAP1Q9UHE8 339 aa12.22□□□□□ -0.45
MUC1-220ENST00000498431 C13orf42A0A1B0GVH6 325 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 PROP1O75360 226 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 RBBP9O75884 186 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 CD36P16671 472 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 GALP22466 123 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 CD40LGP29965 261 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 MC5RP33032 325 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 OR10K2Q6IF99 312 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 TMEM91Q6ZNR0 172 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 C6orf201Q7Z4U5 140 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 CDH26Q8IXH8 852 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 POC5Q8NA72 575 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 OR5T1Q8NG75 326 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 ABRACLQ9P1F3 81 aa12.21□□□□□ -0.45
MUC1-220ENST00000498431 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 H0Y980 276 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 CSN3P07498 182 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 ALDH3B2P48448 385 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 FABP5Q01469 135 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 INSL4Q14641 139 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 FXYD3Q14802 87 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 ZNF880Q6PDB4 577 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
MUC1-220ENST00000498431 GTSCR1Q86UQ5 136 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 OR1A1Q9P1Q5 309 aa12.2□□□□□ -0.46
MUC1-220ENST00000498431 SLC22A1O15245 554 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 ARL6IP5O75915 188 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 NAPSAO96009 420 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 UCHL1P09936 223 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 RPL5P46777 297 aaKnown RBP12.19□□□□□ -0.46
MUC1-220ENST00000498431 PJVKQ0ZLH3 352 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 ZNF383Q8NA42 475 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 OR13F1Q8NGS4 319 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 NEDD4LQ96PU5 975 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 RNF5Q99942 180 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 NICN1Q9BSH3 213 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 C11orf54Q9H0W9 315 aaPredicted RBP12.19□□□□□ -0.46
MUC1-220ENST00000498431 KCNK15Q9H427 330 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 SSR3Q9UNL2 185 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 CEPT1Q9Y6K0 416 aa12.19□□□□□ -0.46
MUC1-220ENST00000498431 H3BUA1 57 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 SLC25A17O43808 307 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 RBMXL2O75526 392 aaKnown RBP12.18□□□□□ -0.46
MUC1-220ENST00000498431 GADD45AP24522 165 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 HTR2CP28335 458 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
MUC1-220ENST00000498431 DYRK1AQ13627 763 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 TIMM50Q3ZCQ8 353 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 HSD17B12Q53GQ0 312 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 GPR141Q7Z602 305 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 SETD6Q8TBK2 473 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
MUC1-220ENST00000498431 UQCC2Q9BRT2 126 aa12.18□□□□□ -0.46
MUC1-220ENST00000498431 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
MUC1-220ENST00000498431 A0A0G2JLM5 398 aa12.17□□□□□ -0.46
MUC1-220ENST00000498431 SPDEFO95238 335 aa12.17□□□□□ -0.46
MUC1-220ENST00000498431 SRMP19623 302 aa12.17□□□□□ -0.46
MUC1-220ENST00000498431 FGF9P31371 208 aaPredicted RBP12.17□□□□□ -0.46
MUC1-220ENST00000498431 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
MUC1-220ENST00000498431 Q8N402 240 aa12.17□□□□□ -0.46
MUC1-220ENST00000498431 NKAIN3Q8N8D7 197 aa12.17□□□□□ -0.46
MUC1-220ENST00000498431 OR51E2Q9H255 320 aa12.17□□□□□ -0.46
MUC1-220ENST00000498431 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
MUC1-220ENST00000498431 A0A0A6YYD4 124 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 RBMY1BA6NDE4 496 aaKnown RBP12.16□□□□□ -0.46
MUC1-220ENST00000498431 RBMY1EA6NEQ0 496 aaKnown RBP12.16□□□□□ -0.46
MUC1-220ENST00000498431 ITGB1BP1O14713 200 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 IGLV2-23P01705 113 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 RBMY1DP0C7P1 496 aaKnown RBP12.16□□□□□ -0.46
MUC1-220ENST00000498431 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
MUC1-220ENST00000498431 CEACAM6P40199 344 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 MECP2P51608 486 aaKnown RBP12.16□□□□□ -0.46
MUC1-220ENST00000498431 UNC119Q13432 240 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 MOGAT2Q3SYC2 334 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 C22orf42Q6IC83 251 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 ZNF343Q6P1L6 599 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 IL17DQ8TAD2 202 aa12.16□□□□□ -0.46
MUC1-220ENST00000498431 FUNDC2Q9BWH2 189 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms