RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 OR9G9P0C7N8 305 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 CAPGP40121 348 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 CEACAM6P40199 344 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 KIR2DS2P43631 304 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 APOC4P55056 127 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 LINC00205P59089 165 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 CBX3Q13185 183 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 ZNF57Q68EA5 555 aaPredicted RBP8.73□□□□□ -1.01
CDK9-205ENST00000498339 TMPRSS11AQ6ZMR5 421 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 FAM223AQ8IWN6 122 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 SVOPQ8N4V2 548 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 KCNG3Q8TAE7 436 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 CACNG8Q8WXS5 425 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 CENPNQ96H22 339 aaPredicted RBP8.73□□□□□ -1.01
CDK9-205ENST00000498339 Q96MT0 163 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 FAAP24Q9BTP7 215 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 C11orf54Q9H0W9 315 aaPredicted RBP8.73□□□□□ -1.01
CDK9-205ENST00000498339 OR1A1Q9P1Q5 309 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 ZNF230Q9UIE0 474 aaPredicted RBP8.73□□□□□ -1.01
CDK9-205ENST00000498339 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 EI24O14681 340 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 SHOXO15266 292 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 HLA-AP01891 365 aaKnown RBP8.72□□□□□ -1.01
CDK9-205ENST00000498339 ZBTB25P24278 435 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 TNXAQ16473 311 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 ANKRD55Q3KP44 614 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 Q499Y3 187 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 OR2G6Q5TZ20 316 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 C1orf146Q5VVC0 180 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 MOB1BQ7L9L4 216 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 C6orf201Q7Z4U5 140 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 ADAD2Q8NCV1 583 aaKnown RBP8.72□□□□□ -1.01
CDK9-205ENST00000498339 ACOT12Q8WYK0 555 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 AKIP1Q9NQ31 210 aa8.72□□□□□ -1.01
CDK9-205ENST00000498339 RPL36Q9Y3U8 105 aaKnown RBP8.72□□□□□ -1.01
CDK9-205ENST00000498339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
CDK9-205ENST00000498339 TRBV5-5A0A0J9YX44 114 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 ZNF320A2RRD8 509 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 DYNC1I1O14576 645 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 ITGB1BP1O14713 200 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 ALPLP05186 524 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 LIMS3P0CW19 117 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 LIMS4P0CW20 117 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 HLA-DRB3P79483 266 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 WFDC3Q8IUB2 231 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 ZFP41Q8N8Y5 198 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 AGMATQ9BSE5 352 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 TP53TG1Q9Y2A0 90 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 EXOSC1Q9Y3B2 195 aaKnown RBP8.71□□□□□ -1.02
CDK9-205ENST00000498339 PKHD1P08F94 4074 aa8.71□□□□□ -1.02
CDK9-205ENST00000498339 PNMA8CA0A1B0GUJ8 204 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 GGCTO75223 188 aaKnown RBP8.7□□□□□ -1.02
CDK9-205ENST00000498339 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 GABRB1P18505 474 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 CBLN1P23435 193 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 MAP2K4P45985 399 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 YIF1BQ5BJH7 314 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 Q6ZWC4 215 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 NKAIN3Q8N8D7 197 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 SRSF12Q8WXF0 261 aaKnown RBP8.7□□□□□ -1.02
CDK9-205ENST00000498339 TMEM59Q9BXS4 323 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 FBXL17Q9UF56 701 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 MUC4Q99102 2169 aa8.7□□□□□ -1.02
CDK9-205ENST00000498339 OR2J3O76001 311 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 ACTL6BO94805 426 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 OR2C1O95371 312 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 IGHV3-23P01764 117 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 MYL12AP19105 171 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 ETV1P50549 477 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 ZNF45Q02386 682 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 RTL8BQ17RB0 113 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 C15orf32Q32M92 178 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 VMA21Q3ZAQ7 101 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 FAM209BQ5JX69 171 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 OR10K2Q6IF99 312 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 BTNL8Q6UX41 500 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 IDO2Q6ZQW0 420 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
CDK9-205ENST00000498339 NECAP1Q8NC96 275 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 OR1L6Q8NGR2 347 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 FBLIM1Q8WUP2 373 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 SLC7A6OSQ96CW6 309 aaPredicted RBP8.69□□□□□ -1.02
CDK9-205ENST00000498339 UQCC2Q9BRT2 126 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 HDHD3Q9BSH5 251 aaPredicted RBP8.69□□□□□ -1.02
CDK9-205ENST00000498339 PLEKHJ1Q9NW61 149 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 BABAM2Q9NXR7 383 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 GHRLQ9UBU3 117 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 MLXQ9UH92 298 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 UBQLN2Q9UHD9 624 aa8.69□□□□□ -1.02
CDK9-205ENST00000498339 TRBV5-7A0A0A0MS05 114 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 LGALS9O00182 355 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 OGG1O15527 345 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 PROP1O75360 226 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 NAPSAO96009 420 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 IFNA4P05014 189 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 CRYGBP07316 175 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 ATF4P18848 351 aaPredicted RBP8.68□□□□□ -1.02
CDK9-205ENST00000498339 ARL3P36405 182 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms